CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 5
extracellular 3
endoplasmic reticulum 4
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76086	Canola	plasma membrane	95.72	85.46
AT3G55550.1	Thale cress	plasma membrane	84.87	75.44
VIT_13s0019g02040.t01	Wine grape	plasma membrane	60.86	54.49
Solyc05g053010.1.1	Tomato	plasma membrane	60.2	53.04
PGSC0003DMT400069794	Potato	plasma membrane	60.03	52.9
KRH31001	Soybean	plasma membrane	57.89	51.99
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	44.08	50.57
CDY23525	Canola	cytosol	30.76	48.7
CDX91325	Canola	cytosol, mitochondrion	20.89	48.11
Os12t0574700-00	Rice	plasma membrane	53.78	47.67
TraesCS5A01G081600.1	Wheat	plasma membrane	54.28	47.48
TraesCS5B01G084800.1	Wheat	plasma membrane	53.95	47.33
TraesCS5D01G091000.1	Wheat	plasma membrane	53.78	47.19
CDY67595	Canola	cytosol	29.77	46.41
HORVU5Hr1G020530.1	Barley	plasma membrane	53.78	46.12
Zm00001d030759_P001	Maize	plasma membrane	52.14	45.94
EES17246	Sorghum	plasma membrane	51.32	45.02
CDX84969	Canola	cytosol	27.47	45.01
CDY65835	Canola	plasma membrane	48.03	44.31
CDX91384	Canola	plasma membrane	49.01	44.28
CDX97474	Canola	extracellular	4.28	44.07
CDY00639	Canola	cytosol, plasma membrane, vacuole	34.7	43.87
CDY14223	Canola	plasma membrane	41.61	43.62
CDY00640	Canola	plasma membrane	31.25	43.58
CDY21254	Canola	plasma membrane	46.38	43.32
CDY71505	Canola	plasma membrane	44.08	43.23
CDY55369	Canola	plasma membrane	47.53	43.13
CDX90939	Canola	plasma membrane	45.89	42.21
CDX98390	Canola	plasma membrane	43.09	41.92
CDY38792	Canola	plastid	38.16	41.58
CDY11617	Canola	plastid	38.16	41.58
CDY06846	Canola	plasma membrane	40.13	41.15
CDX83466	Canola	plasma membrane	43.26	41.09
CDY02414	Canola	plasma membrane	39.47	40.68
CDY38791	Canola	plasma membrane	38.16	40.49
CDY66693	Canola	plasma membrane	40.13	40.26
CDY11619	Canola	plasma membrane	37.66	39.97
CDY30434	Canola	plasma membrane	43.09	39.7
CDY23392	Canola	plasma membrane	43.09	39.7
CDX79808	Canola	cytosol	38.65	39.36
CDY42987	Canola	plasma membrane	32.4	38.33
CDX83467	Canola	plasma membrane	36.35	38.24
CDY44249	Canola	cytosol	40.46	34.65
CDY00641	Canola	extracellular	10.53	34.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	GO:A0A078EPC0	EnsemblPlants:CDY02947
ProteinID:CDY02947	ProteinID:CDY02947.1	InterPro:ConA-like_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
EnsemblPlantsGene:GSBRNA2T00115221001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Lectin_legB_Mn/Ca_BS	InterPro:Legume_lectin_dom	PFAM:PF00069
PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	ScanProsite:PS00307	PFscan:PS50011	PANTHER:PTHR27007
PANTHER:PTHR27007:SF27	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEA752	SEG:seg	:

Description

BnaC04g25390D

Coordinates

chrLK031938:-:788193..790080

Molecular Weight (calculated)

67938.5 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.090

Length

608 amino acids

Sequence
(BLAST)

001: METLVFSWLL FICFTHLASS TTQDFSFIGF KNASPNLILS GVAGIADTGA LRLTTDTSRM TGHAFYSSPI RFKPPGQNRT LSFSTSFVIV MVPEYVTLGG
101: HGLAFAITST PDLQNSLPSQ YFGLLNSSRA NFSSNFLAVE FDTVRDLDFD DINDNHVGID INTLESSTST PAGYFLPNTT KKELFLDSGR VFQAWVDYDS
201: DKKKLDVKLS PLSEKPKLSL LSYNVDLSSV FGDEMYVGFS ASTGMLASSH YILGWNFNMS GEALSLSLPS LPRPPRPIKK KSPGLILGVY LSCSLLIITV
301: LVAAAMFFIK RAKDDDRVEE WELEFGPHRF AYRELKKATN GFGDKELLGS GGFGKVYKGK LQDSDEFVAV KRISHESRQG VREFMSEVSS IGHLRHRNLV
401: QLLGWCRRRQ DLLLVYDYMP NGSLDMYLFH ENPKVILTWK QRFKIIKGVA SGLLYLHEGW EQTVIHRDIK AANVLLDGEM NGRVGDFGLA KLYEHGSNPG
501: ATRVVGTFGY LAPELTKSGK LTTSTDVYAF GAVLLEVTCG RRPIETNALP EELIMVDWIW SRWQSGDIRD VVDRRLNGEF DEEEVVMVIK LGLLCSNNSP
601: ELSLRRIF

Best Arabidopsis Sequence Match ( AT3G55550.1 )
(BLAST)

001: MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG
101: GHGLAFAITP TPDLRGSLPS QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS TPAGYFLANS TKKELFLDGG RVIQAWIDYD
201: SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI LGVSLLCSLL
301: IFAVLVAASL FVVRKVKDED RVEEWELDFG PHRFSYRELK KATNGFGDKE LLGSGGFGKV YKGKLPGSDE FVAVKRISHE SRQGVREFMS EVSSIGHLRH
401: RNLVQLLGWC RRRDDLLLVY DFMPNGSLDM YLFDENPEVI LTWKQRFKII KGVASGLLYL HEGWEQTVIH RDIKAANVLL DSEMNGRVGD FGLAKLYEHG
501: SDPGATRVVG TFGYLAPELT KSGKLTTSTD VYAFGAVLLE VACGRRPIET SALPEELVMV DWVWSRWQSG DIRDVVDRRL NGEFDEEEVV MVIKLGLLCS
601: NNSPEVRPTM RQVVMYLEKQ FPSPEVVPAP DFLDANDSMC LDERSGSAGE FEDFVDSARF YSGPNETTTS SIFSFSGKTR TDPR

Arabidopsis Description

LECRKS4L-type lectin-domain containing receptor kinase S.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.