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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00640 Canola plasma membrane 69.02 76.15
CDY71505 Canola plasma membrane 93.14 72.26
CDX98390 Canola plasma membrane 83.78 64.48
AT3G59700.1 Thale cress plasma membrane 82.95 60.36
CDX97474 Canola extracellular 6.65 54.24
CDY67595 Canola cytosol 42.62 52.56
CDX84969 Canola cytosol 38.67 50.13
CDY23525 Canola cytosol 39.71 49.74
CDX91325 Canola cytosol, mitochondrion 27.23 49.62
CDX83466 Canola plasma membrane 65.07 48.91
CDX83467 Canola plasma membrane 57.8 48.1
CDY30434 Canola plasma membrane 63.83 46.52
CDX79808 Canola cytosol 57.59 46.4
CDY23392 Canola plasma membrane 63.62 46.36
CDY11617 Canola plastid 52.6 45.34
CDY38792 Canola plastid 52.6 45.34
CDY66693 Canola plasma membrane 55.3 43.89
CDY44249 Canola cytosol 63.41 42.96
CDY14223 Canola plasma membrane 48.23 40.0
CDY06846 Canola plasma membrane 48.02 38.95
CDY11619 Canola plasma membrane 45.74 38.39
CDY38791 Canola plasma membrane 45.32 38.05
CDY42987 Canola plasma membrane 39.71 37.16
CDY02947 Canola plasma membrane 43.87 34.7
CDY65835 Canola plasma membrane 45.53 33.23
CDY21254 Canola plasma membrane 44.7 33.03
CDX91384 Canola plasma membrane 45.74 32.69
CDX76086 Canola plasma membrane 45.74 32.31
CDY02414 Canola plasma membrane 38.88 31.69
CDY55369 Canola plasma membrane 43.66 31.34
CDX90939 Canola plasma membrane 42.2 30.71
CDY00641 Canola extracellular 1.04 2.69
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078EIQ8EnsemblPlants:CDY00639ProteinID:CDY00639ProteinID:CDY00639.1InterPro:ConA-like_dom_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00110458001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_dom
PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007
PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EEC921SEG:seg::
Description
BnaC04g22860D
Coordinates
chrLK031920:+:1153595..1155040
Molecular Weight (calculated)
54768.2 Da
IEP (calculated)
6.595
GRAVY (calculated)
-0.152
Length
481 amino acids
Sequence
(BLAST)
001: MRLSIVYSQP DNQLNVTLFP ANISVPPRKP LLSLSKDLSP YLQEEEMYLG FTASTGSVAA IHYMMSWFVN GEIEFPRLDF GMLSILPPYP KKSSQRTKTI
101: LAVCLTVSLI AVFIASWIGF VFYLRHKKVK EVLEEWEIQY GPHRFAYKEL FDATKGFKEK QLLGRGGFGQ VYKGALPGSD AEIAVKRTSH DSRQGMSEFL
201: AEISTIGRLR HPNLVRLLGY CRHKEDLYLV YDFMPNGSLD KYLYYRNNEN QERLTWEQRF KIIKNVASAL LYLHQEWVQV IIHRDIKPAN VLIDHEMNAR
301: LGDFGLAKLY DQGFDPETSK VAGTLGYIAP EFLRTGRATT STDVYAFGLV MLEVVCGRRL IERRAGEEQE VLVDWILELW EKGDDIIVAV EENIRQEENR
401: GQLELVLKLG VLCSHQAASI RPAMSTVMRI LSGVSELPDN LLDVVRDENL KGWAEKPMEL LFGVNSLGTS TYTDSLVSHA R
Best Arabidopsis Sequence Match ( AT3G59700.1 )
(BLAST)
001: MSRELIILCQ PILVLFLTLF YNSHGYFVSQ GSVGIGFNGY FTLTNTTKHT FGQAFENEHV EIKNSSTGVI SSFSVNFFFA IVPEHNQQGS HGMTFVISPT
101: RGLPGASSDQ YLGIFNKTNN GKASNNVIAI ELDIHKDEEF GDIDDNHVGI NINGLRSVAS ASAGYYDDKD GSFKKLSLIS REVMRLSIVY SQPDQQLNVT
201: LFPAEIPVPP LKPLLSLNRD LSPYLLEKMY LGFTASTGSV GAIHYLMGWL VNGVIEYPRL ELSIPVLPPY PKKTSNRTKT VLAVCLTVSV FAAFVASWIG
301: FVFYLRHKKV KEVLEEWEIQ YGPHRFAYKE LFNATKGFKE KQLLGKGGFG QVYKGTLPGS DAEIAVKRTS HDSRQGMSEF LAEISTIGRL RHPNLVRLLG
401: YCRHKENLYL VYDYMPNGSL DKYLNRSENQ ERLTWEQRFR IIKDVATALL HLHQEWVQVI IHRDIKPANV LIDNEMNARL GDFGLAKLYD QGFDPETSKV
501: AGTFGYIAPE FLRTGRATTS TDVYAFGLVM LEVVCGRRII ERRAAENEEY LVDWILELWE NGKIFDAAEE SIRQEQNRGQ VELVLKLGVL CSHQAASIRP
601: AMSVVMRILN GVSQLPDNLL DVVRAEKFRE WPETSMELLL LDVNTSSSLE LTDSSFVSHG R
Arabidopsis Description
LECRK55L-type lectin-domain containing receptor kinase V.5 [Source:UniProtKB/Swiss-Prot;Acc:Q96285]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.