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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30434 Canola plasma membrane 96.21 96.21
CDY67595 Canola cytosol 49.09 83.08
CDY66693 Canola plasma membrane 68.79 74.92
CDX79808 Canola cytosol 66.52 73.53
CDX83466 Canola plasma membrane 68.03 70.16
CDX83467 Canola plasma membrane 59.85 68.34
CDY00639 Canola cytosol, plasma membrane, vacuole 46.36 63.62
CDY71505 Canola plasma membrane 59.09 62.9
CDX98390 Canola plasma membrane 59.39 62.72
CDY00640 Canola plasma membrane 40.45 61.24
CDY00641 Canola extracellular 16.36 58.06
CDY44249 Canola cytosol 60.61 56.34
CDY23525 Canola cytosol 31.52 54.17
CDX84969 Canola cytosol 29.39 52.29
CDY06846 Canola plasma membrane 44.39 49.41
CDY38791 Canola plasma membrane 42.12 48.52
CDY14223 Canola plasma membrane 42.58 48.45
CDY11617 Canola plastid 40.91 48.39
CDY11619 Canola plasma membrane 41.82 48.17
CDY38792 Canola plastid 40.61 48.03
CDX91325 Canola cytosol, mitochondrion 19.09 47.73
CDX97474 Canola extracellular 4.24 47.46
CDY02947 Canola plasma membrane 39.7 43.09
CDY21254 Canola plasma membrane 42.12 42.7
CDY65835 Canola plasma membrane 42.42 42.49
CDY42987 Canola plasma membrane 32.73 42.02
CDX91384 Canola plasma membrane 42.73 41.9
CDY55369 Canola plasma membrane 42.27 41.64
CDY02414 Canola plasma membrane 36.36 40.68
CDX76086 Canola plasma membrane 41.52 40.23
CDX90939 Canola plasma membrane 39.85 39.79
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078GE76UniProt:A0A078GE76EnsemblPlants:CDY23392ProteinID:CDY23392ProteinID:CDY23392.1InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:GSBRNA2T00021997001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51257PANTHER:PTHR27007PANTHER:PTHR27007:SF75
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDED1DSEG:seg::
Description
BnaC04g49200DBnaC04g49200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE76]
Coordinates
chrLK032143:+:263188..265170
Molecular Weight (calculated)
73733.8 Da
IEP (calculated)
7.380
GRAVY (calculated)
-0.124
Length
660 amino acids
Sequence
(BLAST)
001: MIMSSKIPSH VVVLILVLFS CTEHTHGKLI MQGSAGFVKG FRTLTSTKKH TYGQAFHDEI LQFKNSNGTM TSFSVTFFFA IVPQHKRKGS HGMAFVISPT
101: RGMKNASADQ YLGIFNKANN GNRSNHIFAV ELDINKDDEF GDIDDNHVGI NINGMRSIVS APAGYYDQEG HFRSLSLISG SLLRVTILYS HKDTQINVTL
201: SSPEEGYYPK KPLLSLKQDL SPYFSEKMYA GFSASTGSVG AIHYMWVWFI NGYITVPNLD LGIPKFPSYP ITKTKVALIV LGTSLALALF AALVASALSL
301: FYYKRHMKVM EVLEEWEIEC GPHRFAYKEL FKATNGFKQL LGKGGFGQVF KGTLPGSNAK IAVKRVSHGS SQGMREFLAE IATIGRLRHP NLVRLLGYCR
401: YNEELYLVYD YMPNGSLDRY LYGGSSDQEE LSWSQRFKII KDVASALAYL HHEWLQVVIH RDIKPANVLI DDKMNASLGD FGLAKLYDQG HEAQTSSVAG
501: TFGYMAPELM RTGRPTTGTD VYAFGVFMLE VSCGRKLFEP RAEPEEIVLA DWAINRWENG DIIEAASERI RREYDKGQLE VVLKLGVLCS HQAEEVRPDM
601: ATVVKILEGV SELPDNLLDV VRTEKLGRWY EMYGKVLDVE VTMESGGNLT VTEPLTSVGR
Best Arabidopsis Sequence Match ( AT2G43690.3 )
(BLAST)
001: MSMSCKINWL MVLVIIALSN LESSLGRLVF EGSAGLMNGF TTLTNTKKHA YGQAFNDEPF PFKNSVNGNM TSFSFTFFFA IVPEHIDKGS HGIAFVISPT
101: RGIPGASADQ YLGIFNDTND GNSSNHIIAV ELDIHKDDEF GDIDDNHVGI NINGMRSIVS APAGYYDQNG QFKNLSLISG NLLRVTILYS QEEKQLNVTL
201: SPAEEANVPK WPLLSLNKDL SPYLSKNMYI GFTASTGSVG AIHYMWMWYV FTFIIVPKLD FDIPTFPPYP KAESQVKLIV LVTFLTLALF VALAASALIV
301: FFYKRHKKLL EVLEEWEVEC GPHRFSYKEL FNATNGFKQL LGEGGFGPVF KGTLSGSNAK IAVKRVSHDS SQGMRELLAE ISTIGRLRHP NLVRLLGYCR
401: YKEELYLVYD FLPNGSLDKY LYGTSDQKQL SWSQRFKIIK DVASALSYLH HGWIHVVIHR DIKPANVLID DKMNASLGDF GLAKVYDQGY DPQTSRVAGT
501: FGYMAPEIMR TGRPTMGTDV YAFGMFMLEV SCDRKLFEPR AESEEAILTN WAINCWENGD IVEAATERIR QDNDKGQLEL VLKLGVLCSH EAEEVRPDMA
601: TVVKILNGVS ELPDNLLDIV RSEKLENWYE RYSKVIDPVT TEESIGNLAI TEPILPSGRP RLFL
Arabidopsis Description
LECRK53Probable L-type lectin-domain containing receptor kinase V.3 [Source:UniProtKB/Swiss-Prot;Acc:O22834]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.