Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G59730.1 | Thale cress | plasma membrane | 72.58 | 25.81 |
| Bra033984.1-P | Field mustard | plasma membrane | 71.51 | 20.18 |
| AT3G59740.1 | Thale cress | plasma membrane | 69.89 | 19.73 |
| CDY66693 | Canola | plasma membrane | 60.75 | 18.65 |
| CDX98390 | Canola | plasma membrane | 56.99 | 16.96 |
| CDY71505 | Canola | plasma membrane | 56.45 | 16.94 |
| CDY30434 | Canola | plasma membrane | 58.06 | 16.36 |
| CDY23392 | Canola | plasma membrane | 58.06 | 16.36 |
| CDX83466 | Canola | plasma membrane | 55.91 | 16.25 |
| CDX83467 | Canola | plasma membrane | 49.46 | 15.92 |
| AT3G59750.1 | Thale cress | plasma membrane | 53.23 | 15.81 |
| CDX79808 | Canola | cytosol | 48.92 | 15.24 |
| CDY21254 | Canola | plasma membrane | 40.32 | 11.52 |
| CDY55369 | Canola | plasma membrane | 40.86 | 11.34 |
| CDY14223 | Canola | plasma membrane | 34.41 | 11.03 |
| CDY67595 | Canola | cytosol | 23.12 | 11.03 |
| CDX91384 | Canola | plasma membrane | 39.25 | 10.85 |
| CDY38791 | Canola | plasma membrane | 33.33 | 10.82 |
| CDY02414 | Canola | plasma membrane | 33.87 | 10.68 |
| CDY11619 | Canola | plasma membrane | 32.8 | 10.65 |
| CDX90939 | Canola | plasma membrane | 37.63 | 10.59 |
| CDY02947 | Canola | plasma membrane | 34.41 | 10.53 |
| CDY06846 | Canola | plasma membrane | 32.8 | 10.29 |
| CDY44249 | Canola | cytosol | 38.71 | 10.14 |
| CDY42987 | Canola | plasma membrane | 26.88 | 9.73 |
| CDY65835 | Canola | plasma membrane | 34.41 | 9.71 |
| CDX76086 | Canola | plasma membrane | 34.95 | 9.54 |
| CDY23525 | Canola | cytosol | 19.35 | 9.38 |
| CDY11617 | Canola | plastid | 15.05 | 5.02 |
| CDY38792 | Canola | plastid | 14.52 | 4.84 |
| CDX84969 | Canola | cytosol | 6.99 | 3.5 |
| CDY00639 | Canola | cytosol, plasma membrane, vacuole | 2.69 | 1.04 |
| CDX91325 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| CDY00640 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX97474 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| KEGG:04150+2.7.11.1 | KEGG:04151+2.7.11.1 | Gene3D:2.60.120.200 | MapMan:35.1 | GO:A0A078EHQ8 | EnsemblPlants:CDY00641 |
| ProteinID:CDY00641 | ProteinID:CDY00641.1 | InterPro:ConA-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030246 |
| EnsemblPlantsGene:GSBRNA2T00110460001 | InterPro:Legume_lectin_dom | PFAM:PF00139 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF75 | SUPFAM:SSF49899 |
| UniParc:UPI0004EE4798 | SEG:seg | : | : | : | : |
Description
BnaC04g22840D
Coordinates
chrLK031920:-:1185956..1186516
Molecular Weight (calculated)
20551.1 Da
IEP (calculated)
5.491
GRAVY (calculated)
-0.102
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MCRELKVLQI LRVLFFTLSL FTYYSNGKLI PEGAAVFDSS GFAVLTNTTK HSYGQVFNDY PFNPNQNFSF NFFFAIVPEH NHQGSHGMAF VISPTRGLPG
101: ASSDQYLGIF NEPNNGNTSN NVIAIELDIH KDEEFGDIDD NHVGININGL RSVVSASAGY YDSNDGSFKN LSLISGKVMS LSLVYR
101: ASSDQYLGIF NEPNNGNTSN NVIAIELDIH KDEEFGDIDD NHVGININGL RSVVSASAGY YDSNDGSFKN LSLISGKVMS LSLVYR
001: MSRTIGSRVI FLILALFCCT ENSRGKLVMQ GSAGFFKGYR TLTSTKKHAY GQAFEDEIVP FKNSANDTVT SFSVTFFFAI APEDKHKGAH GMAFVISPTR
101: GITGASADQY LGIFNKANNG DSSNHVIAVE LDINKDEEFG DINDNHVGIN INGMRSIKFA PAGYYDQEGQ FKDLSLISGS LLRVTILYSQ MEKQLNVTLS
201: SPEEAYYPNK PLLSLNQDLS PYILENMYVG FSASTGSVRA MHYMLSWFVH GGVDVPNLDL GIPTFPPYPK EKSLVYRIVL VTSLALVLFV ALVASALSIF
301: FYRRHKKVKE VLEEWEIQCG PHRFAYKELF KATKGFKQLL GKGGFGQVFK GTLPGSDAEI AVKRISHDSK QGMQEFLAEI STIGRLRHQN LVRLQGYCRY
401: KEELYLVYDF MPNGSLDKYL YHRANQEQLT WNQRFKIIKD IASALCYLHH EWVQVVIHRD IKPANVLIDH QMNARLGDFG LAKLYDQGYD PQTSRVAGTF
501: WYIAPELIRS GRATTGTDVY AFGLFMLEVS CGRRLIERRT ASDEVVLAEW TLKCWENGDI LEAVNDGIRH EDNREQLELV LKLGVLCSHQ AVAIRPDMSK
601: VVQILGGDLQ LPDNLLDIVK AEKVRMWSET SESVLGVLTS QGSIGTLTLT EPFTSRGR
101: GITGASADQY LGIFNKANNG DSSNHVIAVE LDINKDEEFG DINDNHVGIN INGMRSIKFA PAGYYDQEGQ FKDLSLISGS LLRVTILYSQ MEKQLNVTLS
201: SPEEAYYPNK PLLSLNQDLS PYILENMYVG FSASTGSVRA MHYMLSWFVH GGVDVPNLDL GIPTFPPYPK EKSLVYRIVL VTSLALVLFV ALVASALSIF
301: FYRRHKKVKE VLEEWEIQCG PHRFAYKELF KATKGFKQLL GKGGFGQVFK GTLPGSDAEI AVKRISHDSK QGMQEFLAEI STIGRLRHQN LVRLQGYCRY
401: KEELYLVYDF MPNGSLDKYL YHRANQEQLT WNQRFKIIKD IASALCYLHH EWVQVVIHRD IKPANVLIDH QMNARLGDFG LAKLYDQGYD PQTSRVAGTF
501: WYIAPELIRS GRATTGTDVY AFGLFMLEVS CGRRLIERRT ASDEVVLAEW TLKCWENGDI LEAVNDGIRH EDNREQLELV LKLGVLCSHQ AVAIRPDMSK
601: VVQILGGDLQ LPDNLLDIVK AEKVRMWSET SESVLGVLTS QGSIGTLTLT EPFTSRGR
Arabidopsis Description
LECRK54L-type lectin-domain containing receptor kinase V.4 [Source:UniProtKB/Swiss-Prot;Acc:O22833]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.