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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004777.1-P Field mustard cytosol 95.48 95.48
CDY66693 Canola plasma membrane 89.11 87.79
AT2G43690.1 Thale cress plasma membrane 76.38 68.67
CDY23392 Canola plasma membrane 73.53 66.52
CDY67595 Canola cytosol 43.05 65.9
CDY30434 Canola plasma membrane 72.36 65.45
CDX83467 Canola plasma membrane 60.64 62.63
CDX83466 Canola plasma membrane 64.49 60.16
CDY00639 Canola cytosol, plasma membrane, vacuole 46.4 57.59
CDY00640 Canola plasma membrane 41.04 56.19
CDY71505 Canola plasma membrane 58.29 56.13
CDX98390 Canola plasma membrane 57.62 55.04
CDY23525 Canola cytosol 34.34 53.39
CDY44249 Canola cytosol 59.97 50.42
CDY00641 Canola extracellular 15.24 48.92
CDX84969 Canola cytosol 28.48 45.82
CDX97474 Canola extracellular 4.52 45.76
CDY14223 Canola plasma membrane 42.88 44.14
CDY06846 Canola plasma membrane 43.72 44.01
CDX91325 Canola cytosol, mitochondrion 19.1 43.18
CDY11619 Canola plasma membrane 41.37 43.11
CDY38791 Canola plasma membrane 41.21 42.93
CDY11617 Canola plastid 40.03 42.83
CDY38792 Canola plastid 39.87 42.65
CDY02947 Canola plasma membrane 39.36 38.65
CDY42987 Canola plasma membrane 32.83 38.13
CDY55369 Canola plasma membrane 42.21 37.61
CDY21254 Canola plasma membrane 40.87 37.48
CDY65835 Canola plasma membrane 41.21 37.33
CDX76086 Canola plasma membrane 41.88 36.71
CDX90939 Canola plasma membrane 40.54 36.61
CDX91384 Canola plasma membrane 41.04 36.4
CDY02414 Canola plasma membrane 34.0 34.41
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078CXE9EnsemblPlants:CDX79808ProteinID:CDX79808ProteinID:CDX79808.1InterPro:ConA-like_dom_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00132640001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_dom
PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007
PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EF341ESEG:seg::
Description
BnaA05g03480D
Coordinates
chrLK031819:-:233324..235195
Molecular Weight (calculated)
67211.6 Da
IEP (calculated)
6.738
GRAVY (calculated)
-0.200
Length
597 amino acids
Sequence
(BLAST)
001: MDTSHGKLII EESASNMNGY TTLTNTKKNS YGQAFNDKPF PFKTSANGTL TSFSFTFFFA IVRGLPDASS DQYLGIFNAT NNGESSNQII AVKLDVHKDD
101: EFGDINDNHV GININGMKSI ISAPAGYYDQ KGEFKTLSLI SGKLLRITIL YSHEERRLNV TLSPPAETYH PKQPLLSLNQ DLSPYLKEDM YVGFTASTGY
201: IGAIHYMLIW YAYTFIIVPH LDFAIPIFPP YPKIESHVKR IVLATSLTLT LFVALSASAL SIFLYKKHKK VLEVLEEWEI ACGPHRFAYS ELFKATNGFK
301: QILGEGGFGK VFKGTLPGSD AGIAVKRVSR GSSQGMREFL AEVTTIGRLR HPNLVRLLGY CRYKEELYLV YDCMPNGSLD KYLYGSDQEQ LSWTQRHKII
401: KDVAYALSYL HHDWLQVVIH RDIKPANVLL DDKMNASLGD FGLAKLHERG HEVQTSRVAG TFGYMAPELV RTGRPTTGTD AVLPEWVVNR WEQGDIIEAA
501: YERIRQDHDK GELELLLKLG VLCSHQAEEV RPDMSTVVKI LEGVSELPDN VLDIVRTEKK EKWYEKFSEV LDSTVESVSN LRVTEPIASL ERIKLLL
Best Arabidopsis Sequence Match ( AT2G43690.3 )
(BLAST)
001: MSMSCKINWL MVLVIIALSN LESSLGRLVF EGSAGLMNGF TTLTNTKKHA YGQAFNDEPF PFKNSVNGNM TSFSFTFFFA IVPEHIDKGS HGIAFVISPT
101: RGIPGASADQ YLGIFNDTND GNSSNHIIAV ELDIHKDDEF GDIDDNHVGI NINGMRSIVS APAGYYDQNG QFKNLSLISG NLLRVTILYS QEEKQLNVTL
201: SPAEEANVPK WPLLSLNKDL SPYLSKNMYI GFTASTGSVG AIHYMWMWYV FTFIIVPKLD FDIPTFPPYP KAESQVKLIV LVTFLTLALF VALAASALIV
301: FFYKRHKKLL EVLEEWEVEC GPHRFSYKEL FNATNGFKQL LGEGGFGPVF KGTLSGSNAK IAVKRVSHDS SQGMRELLAE ISTIGRLRHP NLVRLLGYCR
401: YKEELYLVYD FLPNGSLDKY LYGTSDQKQL SWSQRFKIIK DVASALSYLH HGWIHVVIHR DIKPANVLID DKMNASLGDF GLAKVYDQGY DPQTSRVAGT
501: FGYMAPEIMR TGRPTMGTDV YAFGMFMLEV SCDRKLFEPR AESEEAILTN WAINCWENGD IVEAATERIR QDNDKGQLEL VLKLGVLCSH EAEEVRPDMA
601: TVVKILNGVS ELPDNLLDIV RSEKLENWYE RYSKVIDPVT TEESIGNLAI TEPILPSGRP RLFL
Arabidopsis Description
LECRK53Probable L-type lectin-domain containing receptor kinase V.3 [Source:UniProtKB/Swiss-Prot;Acc:O22834]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.