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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037688.1-P Field mustard plasma membrane 98.94 98.94
CDY23392 Canola plasma membrane 96.21 96.21
CDY67595 Canola cytosol 49.55 83.85
CDY66693 Canola plasma membrane 68.64 74.75
CDX79808 Canola cytosol 65.45 72.36
CDX83466 Canola plasma membrane 67.58 69.69
CDX83467 Canola plasma membrane 59.39 67.82
CDY00639 Canola cytosol, plasma membrane, vacuole 46.52 63.83
CDY71505 Canola plasma membrane 59.09 62.9
CDX98390 Canola plasma membrane 59.39 62.72
CDY00640 Canola plasma membrane 40.45 61.24
CDY00641 Canola extracellular 16.36 58.06
CDY44249 Canola cytosol 60.3 56.06
CDY23525 Canola cytosol 31.21 53.65
CDX84969 Canola cytosol 29.24 52.02
CDX97474 Canola extracellular 4.39 49.15
CDY06846 Canola plasma membrane 43.48 48.4
CDY11617 Canola plastid 40.76 48.21
CDY14223 Canola plasma membrane 42.12 47.93
CDY38792 Canola plastid 40.3 47.67
CDY38791 Canola plasma membrane 41.36 47.64
CDY11619 Canola plasma membrane 40.91 47.12
CDX91325 Canola cytosol, mitochondrion 18.79 46.97
CDY02947 Canola plasma membrane 39.7 43.09
CDY21254 Canola plasma membrane 41.52 42.09
CDY42987 Canola plasma membrane 32.73 42.02
CDX91384 Canola plasma membrane 42.42 41.6
CDY65835 Canola plasma membrane 41.52 41.58
CDY55369 Canola plasma membrane 42.12 41.49
CDY02414 Canola plasma membrane 36.06 40.34
CDX76086 Canola plasma membrane 41.52 40.23
CDX90939 Canola plasma membrane 39.85 39.79
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078GZ66UniProt:A0A078GZ66EnsemblPlants:CDY30434ProteinID:CDY30434ProteinID:CDY30434.1InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:GSBRNA2T00045134001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEAC42SEG:seg:::
Description
BnaA04g25350DBnaA04g25350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ66]
Coordinates
chrLK032253:+:257788..259770
Molecular Weight (calculated)
73810.0 Da
IEP (calculated)
7.244
GRAVY (calculated)
-0.101
Length
660 amino acids
Sequence
(BLAST)
001: MIMSSKILSH VVFLILVLFC CTEHTHGKLI MQGSAGFVKG FRTLTSTKKH TYGQAFHDEI LQFKNSNGTM TSFSVTFFFA IVPEHKRKGS HGMAFVISPS
101: RGITNASADQ YLGIFTKANN GNMSNHIFAV ELDINKDDEF GDIDDNHVGI NINGMRSVLS APAGYYDQEG HFRSLSLISG NLLRLTILYS HKDAQINVTL
201: SSPEEGYYPK KPLLSLKQDL SPYFSEKMYA GFSASTGSVG AMHYMWVWFI NGYITVPNLD LGIPKFPSYP ITKTKVALIV LGTSLALALF AALVATGLSF
301: FFYKRHMKVM EVLEEWEIEC GPHRFAYKEL FKATNGFKQL LGKGGFGQVF KGTLPGSNAK IAVKRVSHGS SQGMREFLAE IATIGRLRHP NLVRLLGYCR
401: YNEELYLVYD FMPNGSLDRY LHGGSSDQEE LSWSQRFKII KDVASALAYL HHEWMQVVVH RDIKPANVLI DDKMNASLGD FGLAKLYDQG HEAQTSRVAG
501: TFGYMAPELM RTGRPTTGTD VYAFGVFMLE VSCGRKLFEP RAEPEEIVLA DWAINRWEKG DIIEAASERI RREYDKGQLE VVLKLGVLCS HQAEEVRPDM
601: ATVVKILEGV SELPDNLLDV VRTEKLGRWY EMYGKVLDVE VTMESGGNLT VTEPLTSVGR
Best Arabidopsis Sequence Match ( AT2G43700.1 )
(BLAST)
001: MSRTIGSRVI FLILALFCCT ENSRGKLVMQ GSAGFFKGYR TLTSTKKHAY GQAFEDEIVP FKNSANDTVT SFSVTFFFAI APEDKHKGAH GMAFVISPTR
101: GITGASADQY LGIFNKANNG DSSNHVIAVE LDINKDEEFG DINDNHVGIN INGMRSIKFA PAGYYDQEGQ FKDLSLISGS LLRVTILYSQ MEKQLNVTLS
201: SPEEAYYPNK PLLSLNQDLS PYILENMYVG FSASTGSVRA MHYMLSWFVH GGVDVPNLDL GIPTFPPYPK EKSLVYRIVL VTSLALVLFV ALVASALSIF
301: FYRRHKKVKE VLEEWEIQCG PHRFAYKELF KATKGFKQLL GKGGFGQVFK GTLPGSDAEI AVKRISHDSK QGMQEFLAEI STIGRLRHQN LVRLQGYCRY
401: KEELYLVYDF MPNGSLDKYL YHRANQEQLT WNQRFKIIKD IASALCYLHH EWVQVVIHRD IKPANVLIDH QMNARLGDFG LAKLYDQGYD PQTSRVAGTF
501: WYIAPELIRS GRATTGTDVY AFGLFMLEVS CGRRLIERRT ASDEVVLAEW TLKCWENGDI LEAVNDGIRH EDNREQLELV LKLGVLCSHQ AVAIRPDMSK
601: VVQILGGDLQ LPDNLLDIVK AEKVRMWSET SESVLGVLTS QGSIGTLTLT EPFTSRGR
Arabidopsis Description
LECRK54L-type lectin-domain containing receptor kinase V.4 [Source:UniProtKB/Swiss-Prot;Acc:O22833]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.