CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30434	Canola	plasma membrane	83.85	49.55
CDY23392	Canola	plasma membrane	83.08	49.09
CDY00640	Canola	plasma membrane	51.28	45.87
CDY66693	Canola	plasma membrane	70.26	45.21
CDX84969	Canola	cytosol	42.82	45.01
AT2G43690.1	Thale cress	plasma membrane	75.64	44.43
CDX97474	Canola	extracellular	6.67	44.07
CDX79808	Canola	cytosol	65.9	43.05
CDY00639	Canola	cytosol, plasma membrane, vacuole	52.56	42.62
CDX83466	Canola	plasma membrane	69.74	42.5
CDX83467	Canola	plasma membrane	61.79	41.7
CDY23525	Canola	cytosol	41.03	41.67
CDX91325	Canola	cytosol, mitochondrion	26.92	39.77
CDX98390	Canola	plasma membrane	60.0	37.44
CDY44249	Canola	cytosol	67.69	37.18
CDY71505	Canola	plasma membrane	57.95	36.45
CDY38792	Canola	plastid	50.26	35.13
CDY11617	Canola	plastid	50.26	35.13
CDY14223	Canola	plasma membrane	44.36	29.83
CDY02947	Canola	plasma membrane	46.41	29.77
CDY06846	Canola	plasma membrane	44.62	29.34
CDY38791	Canola	plasma membrane	41.54	28.27
CDY11619	Canola	plasma membrane	41.28	28.1
CDX91384	Canola	plasma membrane	46.67	27.04
CDX76086	Canola	plasma membrane	47.18	27.02
CDY42987	Canola	plasma membrane	35.38	26.85
CDY21254	Canola	plasma membrane	44.62	26.73
CDY65835	Canola	plasma membrane	44.36	26.25
CDY55369	Canola	plasma membrane	44.62	25.97
CDX90939	Canola	plasma membrane	41.79	24.66
CDY02414	Canola	plasma membrane	37.18	24.58
CDY00641	Canola	extracellular	11.03	23.12

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20
GO:A0A078JMD4	UniProt:A0A078JMD4	EnsemblPlants:CDY67595	ProteinID:CDY67595	ProteinID:CDY67595.1	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00065163001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF75	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF30D6	SEG:seg	:

Description

BnaCnng55610DBnaCnng55610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMD4]

Coordinates

chrLK036293:+:670..2531

Molecular Weight (calculated)

44318.9 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.363

Length

390 amino acids

Sequence
(BLAST)

001: MIMSHKIVSH VLFMHKNKGS HDSSNHIIAV ELDIHKNDEF GDIDDNHVGI NINGMRSNIS ASAGYYDQKG EFISLSLDTL TFFFYKRHKK VLEVLEEWEI
101: ECGPHRFAYK EFSKDTNGFK HLLGKGGFGQ VFKGTLQGSE TKIAVKRVSH GSSQGMREFM AEIATIGRLR HPNLVRLLGY CRYKEELYLV YDFMPNGSLD
201: RYLYAESDQE QLTWDQRFKI IKDVSSALAY LHHGWLQVVV HRDIKPANVL IDDKMNASLG DFGLAKLYDQ GSEAQTSRVA GTFGYMAPEL MRTGRPTTGT
301: DVYAFGVFML EVSCGRKLFE PRAEPEEVVL ADWTINRWEN GDICCVLTRL KRTEKMGKWY ETYGSVLGTD MTTESAGNLT ITERLTSVGR

Best Arabidopsis Sequence Match ( AT2G43690.1 )
(BLAST)

001: MSMSCKINWL MVLVIIALSN LESSLGRLVF EGSAGLMNGF TTLTNTKKHA YGQAFNDEPF PFKNSVNGNM TSFSFTFFFA IVPEHIDKGS HGIAFVISPT
101: RGIPGASADQ YLGIFNDTND GNSSNHIIAV ELDIHKDDEF GDIDDNHVGI NINGMRSIVS APAGYYDQNG QFKNLSLISG NLLRVTILYS QEEKQLNVTL
201: SPAEEANVPK WPLLSLNKDL SPYLSKNMYI GFTASTGSVG AIHYMWMWYV FTFIIVPKLD FDIPTFPPYP KAESQVKLIV LVTFLTLALF VALAASALIV
301: FFYKRHKKLL EVLEEWEVEC GPHRFSYKEL FNATNGFKQL LGEGGFGPVF KGTLSGSNAK IAVKRVSHDS SQGMRELLAE ISTIGRLRHP NLVRLLGYCR
401: YKEELYLVYD FLPNGSLDKY LYGTSDQKQL SWSQRFKIIK DVASALSYLH HGWIHVVIHR DIKPANVLID DKMNASLGDF GLAKVYDQGY DPQTSRVAGT
501: FGYMAPEIMR TGRPTMGTDV YAFGMFMLEV SCDRKLFEPR AESEEAILTN WAINCWENGD IVEAATERIR QDNDKGQLEL VLKLGVLCSH EAEEVRPDMA
601: TVVKILNGVS ELPDNLLDIV RSEKLENWYE RYSKVIDPVT TEESIGNLAI TEPILPSGRP RLFL

Arabidopsis Description

LECRK53Probable L-type lectin-domain containing receptor kinase V.3 [Source:UniProtKB/Swiss-Prot;Acc:O22834]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.