CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38792	Canola	plastid	95.7	95.7
AT1G70130.1	Thale cress	plasma membrane	83.51	71.04
CDX84969	Canola	cytosol	47.13	70.89
CDY23525	Canola	cytosol	43.73	63.54
CDX97474	Canola	extracellular	6.45	61.02
CDY14223	Canola	plasma membrane	59.5	57.24
CDY06846	Canola	plasma membrane	58.6	55.14
CDY00639	Canola	cytosol, plasma membrane, vacuole	45.34	52.6
CDY00640	Canola	plasma membrane	40.68	52.06
CDY42987	Canola	plasma membrane	47.85	51.95
CDY38791	Canola	plasma membrane	53.23	51.83
CDY11619	Canola	plasma membrane	53.05	51.66
CDY67595	Canola	cytosol	35.13	50.26
CDX91325	Canola	cytosol, mitochondrion	23.48	49.62
CDY71505	Canola	plasma membrane	47.85	43.06
CDX98390	Canola	plasma membrane	48.03	42.88
CDX83467	Canola	plasma membrane	44.09	42.56
CDX83466	Canola	plasma membrane	48.03	41.88
CDY23392	Canola	plasma membrane	48.39	40.91
CDY30434	Canola	plasma membrane	48.21	40.76
CDX79808	Canola	cytosol	42.83	40.03
CDY66693	Canola	plasma membrane	43.01	39.6
CDY02947	Canola	plasma membrane	41.58	38.16
CDX91384	Canola	plasma membrane	44.98	37.3
CDY65835	Canola	plasma membrane	43.73	37.03
CDY44249	Canola	cytosol	46.77	36.76
CDY55369	Canola	plasma membrane	43.73	36.42
CDX90939	Canola	plasma membrane	42.47	35.85
CDX76086	Canola	plasma membrane	43.37	35.54
CDY21254	Canola	plasma membrane	41.04	35.18
CDY02414	Canola	plasma membrane	35.3	33.39
CDY00641	Canola	extracellular	5.02	15.05

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20
GO:A0A078FF60	UniProt:A0A078FF60	EnsemblPlants:CDY11617	ProteinID:CDY11617	ProteinID:CDY11617.1	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
EnsemblPlantsGene:GSBRNA2T00049739001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF75	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EDF23D	:	:	:	:	:

Description

BnaC06g31220DBnaC06g31220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF60]

Coordinates

chrLK032012:+:519056..520824

Molecular Weight (calculated)

61697.3 Da

IEP (calculated)

8.589

GRAVY (calculated)

-0.068

Length

558 amino acids

Sequence
(BLAST)

001: MATRKTVAGC GLSFNISSTK GLNSSASNRS VSVEFHTAKT DGKDVNEVVI NVSGLDSYRN HSAGYFKDDG SGFVDIEIAS GAPIQVWVEY NNSAKQLDVT
101: MHSIYTCKPK TPLLSLRKDL YPYLLEYMYV GFTSVGSPTS SHYILGWNFN NNGSVLPIVH SRLPKLPDDK DRSLSRKILA ISLSLSGFTL IVVLVFGVVF
201: YLKRNKFLEV IEDWEVQFGP HRFTYKDLFI ATKGFKNSEL LGRGGFGKVF KGILPLSSIP IAVKKISHDS KQGMREFLAE IATIGRLRHP DLVRLLGYCR
301: RKGELYLVYD FMPKGSLDKF LYNQPDQVLD WSQRFKIIKD VASGLCYLHQ QWMQVIIHRD IKPANILLDE NMNAKLGDFG LAKLCDHGID SQSSNVAGTF
401: GYISPELSRT GKSSTSSDVF AFGVFMLEIT CGRKPIEPRG SPSEIVLTDW VLDRWDSGDI LQVVDEKLGH KYLAAQVTLV LKLGLLCSHP VAATRPSMSS
501: VMQFLDGVAT LPHNLLELVN ARNIDGGFDA LGEAKEPPGA SSNTFSSVMT ESFVSGGR

Best Arabidopsis Sequence Match ( AT1G70130.1 )
(BLAST)

001: MSLLLKMLLF SLFFFYMASI SQCSDPTGGQ FSFNGYLYTD GVADLNPDGL FKLITSKTQG GAGQVLYQFP LQFKNSPNGT VSSFSTTFVF AIVAVRKTIA
101: GCGLSFNISP TKGLNSVPNI DHSNHSVSVG FHTAKSDKPD GEDVNLVGIN IDSSKMDRNC SAGYYKDDGR LVNLDIASGK PIQVWIEYNN STKQLDVTMH
201: SIKISKPKIP LLSMRKDLSP YLHEYMYIGF TSVGSPTSSH YILGWSFNNK GAVSDINLSR LPKVPDEDQE RSLSSKILAI SLSISGVTLV IVLILGVMLF
301: LKRKKFLEVI EDWEVQFGPH KFTYKDLFIA TKGFKNSEVL GKGGFGKVFK GILPLSSIPI AVKKISHDSR QGMREFLAEI ATIGRLRHPD LVRLLGYCRR
401: KGELYLVYDF MPKGSLDKFL YNQPNQILDW SQRFNIIKDV ASGLCYLHQQ WVQVIIHRDI KPANILLDEN MNAKLGDFGL AKLCDHGIDS QTSNVAGTFG
501: YISPELSRTG KSSTSSDVFA FGVFMLEITC GRRPIGPRGS PSEMVLTDWV LDCWDSGDIL QVVDEKLGHR YLAEQVTLVL KLGLLCSHPV AATRPSMSSV
601: IQFLDGVATL PHNLLDLVNS RIINEGFDTL GVTTESMEAS SNVSLVMTES FLSSGR

Arabidopsis Description

LECRK52Putative L-type lectin-domain containing receptor kinase V.2 [Source:UniProtKB/Swiss-Prot;Acc:O04533]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.