CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97474	Canola	extracellular	10.42	67.8
CDX84969	Canola	cytosol	48.44	50.13
CDY11617	Canola	plastid	63.54	43.73
CDY38792	Canola	plastid	63.02	43.37
CDY67595	Canola	cytosol	41.67	41.03
CDY42987	Canola	plasma membrane	53.91	40.27
CDY00639	Canola	cytosol, plasma membrane, vacuole	49.74	39.71
CDY14223	Canola	plasma membrane	59.11	39.14
CDY11619	Canola	plasma membrane	57.55	38.57
CDY38791	Canola	plasma membrane	57.29	38.39
CDY06846	Canola	plasma membrane	58.33	37.77
CDY00640	Canola	plasma membrane	41.15	36.24
CDX83467	Canola	plasma membrane	53.91	35.81
CDY71505	Canola	plasma membrane	56.25	34.84
CDX98390	Canola	plasma membrane	56.25	34.56
CDX79808	Canola	cytosol	53.39	34.34
CDY66693	Canola	plasma membrane	52.34	33.17
CDX83466	Canola	plasma membrane	53.65	32.19
CDY23392	Canola	plasma membrane	54.17	31.52
CDY30434	Canola	plasma membrane	53.65	31.21
CDY02947	Canola	plasma membrane	48.7	30.76
CDY44249	Canola	cytosol	53.65	29.01
CDY55369	Canola	plasma membrane	49.74	28.51
CDY21254	Canola	plasma membrane	47.92	28.26
CDX91384	Canola	plasma membrane	48.96	27.93
CDY65835	Canola	plasma membrane	47.92	27.92
CDX76086	Canola	plasma membrane	48.44	27.31
CDX90939	Canola	plasma membrane	46.09	26.78
CDX91325	Canola	cytosol, mitochondrion	17.97	26.14
CDY02414	Canola	plasma membrane	39.32	25.59
CDY00641	Canola	extracellular	9.38	19.35

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20
GO:A0A078GAU6	UniProt:A0A078GAU6	EnsemblPlants:CDY23525	ProteinID:CDY23525	ProteinID:CDY23525.1	InterPro:ConA-like_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00022168001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069
PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF75
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EEDEAF	SEG:seg	:	:	:

Description

BnaC06g24940DBnaC06g24940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAU6]

Coordinates

chrLK032144:+:355217..356371

Molecular Weight (calculated)

43665.0 Da

IEP (calculated)

7.365

GRAVY (calculated)

-0.165

Length

384 amino acids

Sequence
(BLAST)

001: MGYPSNHIVA IELDTTFDQP LGDIDANHVG IDINSLVSDK ADSAHYFKDD GTPTNLSLSS GDLMQLWVEY DSKHKQLNVT LHPLLVPKPK IPLLSLQKDL
101: SQYLLEYMYI GFTSATGELT ASHYIFDWKF KMNGTVSDIN HSRLPKIPLE DQLESHSLKR ILIISLSVSG AILVIFLILG LWLFLKKKKL MEVLEDWEVQ
201: FGPHRFAYKD LHTATKGFKG TELLGRGGFG KVYKGTLPVS NIEIAVKRVS HDSRQGMREF IAEIATIGRL RHPNLVQLQG YCRHKGELYL VYDCMPKGSL
301: DKLLYHQQPM EILDWSQRFK IIKDVSYGLC YLHEQWVQVI IHRDIKPANI LLDHNMNAKL GDFGLAKLYD HGIDPQTSHV AGMQ

Best Arabidopsis Sequence Match ( AT1G70110.1 )
(BLAST)

001: MVLLLFLVLF FVPESVVCQR PNPNGVEFNT SGNMYTSGSA YINNNGLIRL TNSTPQTTGQ VFYNDQLRFK NSVNGTVSSF STTFVFSIEF HNGIYGGYGI
101: AFVICPTRDL SPTFPTTYLG LFNRSNMGDP KNHIVAVELD TKVDQQFEDK DANHVGIDIN TLVSDTVALA GYYMDNGTFR SLLLNSGQPM QIWIEYDSKQ
201: KQINVTLHPL YVPKPKIPLL SLEKDLSPYL LELMYVGFTS TTGDLTASHY ILGWTFKMNG TTPDIDPSRL PKIPRYNQPW IQSPNGILTI SLTVSGVIIL
301: IILSLSLWLF LKRKKLLEVL EDWEVQFGPH RFAFKDLHIA TKGFKDTEVL GKGGFGKVYK GTLPVSNVEI AVKMVSHDSR QGMREFIAEI ATIGRLRHPN
401: LVRLQGYCRH KGELYLVYDC MAKGSLDKFL YHQQTGNLDW SQRFKIIKDV ASGLYYLHQQ WVQVIIHRDI KPANILLDAN MNAKLGDFGL AKLCDHGTDP
501: QTSHVAGTLG YISPELSRTG KASTRSDVFA FGIVMLEIAC GRKPILPRAS QREMVLTDWV LECWENEDIM QVLDHKIGQE YVEEQAALVL KLGLFCSHPV
601: AAIRPNMSSV IQLLDSVAQL PHNLLDIVQT REVHRGTEIS GEAADSPESC SIAPLTFTES FVSHGR

Arabidopsis Description

LECRK51Putative L-type lectin-domain containing receptor kinase V.1 [Source:UniProtKB/Swiss-Prot;Acc:O04534]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.