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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014532.1-P Field mustard plasma membrane 99.03 93.46
CDY00639 Canola cytosol, plasma membrane, vacuole 72.26 93.14
CDX98390 Canola plasma membrane 87.74 87.04
AT3G59700.1 Thale cress plasma membrane 84.35 79.12
CDY00640 Canola plasma membrane 53.23 75.69
CDX83466 Canola plasma membrane 64.03 62.03
CDX83467 Canola plasma membrane 57.1 61.25
CDY30434 Canola plasma membrane 62.9 59.09
CDY23392 Canola plasma membrane 62.9 59.09
CDY66693 Canola plasma membrane 57.42 58.75
CDX79808 Canola cytosol 56.13 58.29
CDY67595 Canola cytosol 36.45 57.95
CDY00641 Canola extracellular 16.94 56.45
CDY23525 Canola cytosol 34.84 56.25
CDX97474 Canola extracellular 4.84 50.85
CDY44249 Canola cytosol 57.9 50.56
CDX84969 Canola cytosol 29.84 49.87
CDY06846 Canola plasma membrane 47.1 49.24
CDY14223 Canola plasma membrane 45.81 48.97
CDY11619 Canola plasma membrane 44.35 47.99
CDY11617 Canola plastid 43.06 47.85
CDY38792 Canola plastid 43.06 47.85
CDY38791 Canola plasma membrane 44.19 47.82
CDX91325 Canola cytosol, mitochondrion 20.32 47.73
CDY02947 Canola plasma membrane 43.23 44.08
CDY42987 Canola plasma membrane 35.65 43.0
CDY21254 Canola plasma membrane 44.52 42.4
CDY65835 Canola plasma membrane 44.52 41.88
CDX91384 Canola plasma membrane 45.32 41.75
CDY02414 Canola plasma membrane 39.35 41.36
CDX76086 Canola plasma membrane 44.68 40.68
CDY55369 Canola plasma membrane 43.39 40.15
CDX90939 Canola plasma membrane 41.61 39.03
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078JYL1UniProt:A0A078JYL1EnsemblPlants:CDY71505ProteinID:CDY71505ProteinID:CDY71505.1InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0030246
EnsemblPlantsGene:GSBRNA2T00016729001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEEBDFSEG:seg:::
Description
BnaA04g27230DBnaA04g27230D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYL1]
Coordinates
chrLK046130:+:632..2560
Molecular Weight (calculated)
70180.2 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.135
Length
620 amino acids
Sequence
(BLAST)
001: MFLLFEAVLV LFFHNSHGYF IPTGSVGIGY NGYFTLTNTT KHTHGQAFDS NPVTFTNSST NITTSFSINF FFAIVPEHDQ QGSHGMAFVI SPTRGLPGAS
101: SDQYLGIFNE TTNGKASNNV IAIELDIHKD EEFGDIDDNH VGFRNLSLIS RNVMRLSIVY SQPDKQLNVT LFPANISVPP RKPLLSLSKD LSPYLLEEEM
201: YLGFTASTGS VGAIHYMTGW FITGEIEFPR LEFGMLPILP PYPKKSSQRT KTILAVCLTV SVIAAFIASW FGFVFYLRHK KVKEVLEEWE IQYGPHRFAY
301: KELFDATKGF KEKQLLGRGG FGQVYKGALP GSDAEIAVKR TSHDSRQGMS EFLAEISTIG RLRHPNLVRL LGYCRHKEDL YLVYDFMPNG SLDKYLYYRN
401: NENQERLTWE QRFKIIKNVA AALLYLHQEW VQVIIHRDIK PANVLIDHEM NARLGDFGLA KLYDQGFDPE TSKVAGTLGY IAPEFLRTGR ATTSTDVYAF
501: GLVMLEVVCG RRLIERRAGE EQEVLVDWIL ELWEKGDDIL VAVEENIRQE QNRGQLELVL KLGVLCSHQA ASIRPAMSTV MRILNGVSEL PDNLLDVVRD
601: ENLRGWPEKP MELLFDVNSL
Best Arabidopsis Sequence Match ( AT3G59700.1 )
(BLAST)
001: MSRELIILCQ PILVLFLTLF YNSHGYFVSQ GSVGIGFNGY FTLTNTTKHT FGQAFENEHV EIKNSSTGVI SSFSVNFFFA IVPEHNQQGS HGMTFVISPT
101: RGLPGASSDQ YLGIFNKTNN GKASNNVIAI ELDIHKDEEF GDIDDNHVGI NINGLRSVAS ASAGYYDDKD GSFKKLSLIS REVMRLSIVY SQPDQQLNVT
201: LFPAEIPVPP LKPLLSLNRD LSPYLLEKMY LGFTASTGSV GAIHYLMGWL VNGVIEYPRL ELSIPVLPPY PKKTSNRTKT VLAVCLTVSV FAAFVASWIG
301: FVFYLRHKKV KEVLEEWEIQ YGPHRFAYKE LFNATKGFKE KQLLGKGGFG QVYKGTLPGS DAEIAVKRTS HDSRQGMSEF LAEISTIGRL RHPNLVRLLG
401: YCRHKENLYL VYDYMPNGSL DKYLNRSENQ ERLTWEQRFR IIKDVATALL HLHQEWVQVI IHRDIKPANV LIDNEMNARL GDFGLAKLYD QGFDPETSKV
501: AGTFGYIAPE FLRTGRATTS TDVYAFGLVM LEVVCGRRII ERRAAENEEY LVDWILELWE NGKIFDAAEE SIRQEQNRGQ VELVLKLGVL CSHQAASIRP
601: AMSVVMRILN GVSQLPDNLL DVVRAEKFRE WPETSMELLL LDVNTSSSLE LTDSSFVSHG R
Arabidopsis Description
LECRK55L-type lectin-domain containing receptor kinase V.5 [Source:UniProtKB/Swiss-Prot;Acc:Q96285]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.