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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71505 Canola plasma membrane 87.04 87.74
CDY00639 Canola cytosol, plasma membrane, vacuole 64.48 83.78
AT3G59700.1 Thale cress plasma membrane 84.0 79.43
CDY00640 Canola plasma membrane 53.12 76.15
CDX83466 Canola plasma membrane 64.16 62.66
CDX83467 Canola plasma membrane 56.96 61.59
CDY67595 Canola cytosol 37.44 60.0
CDY30434 Canola plasma membrane 62.72 59.39
CDY23392 Canola plasma membrane 62.72 59.39
CDY66693 Canola plasma membrane 56.96 58.75
CDX79808 Canola cytosol 55.04 57.62
CDY00641 Canola extracellular 16.96 56.99
CDY23525 Canola cytosol 34.56 56.25
CDX84969 Canola cytosol 30.72 51.75
CDX97474 Canola extracellular 4.8 50.85
CDY44249 Canola cytosol 57.28 50.42
CDY14223 Canola plasma membrane 46.08 49.66
CDY06846 Canola plasma membrane 46.88 49.41
CDY11619 Canola plasma membrane 44.8 48.87
CDY38791 Canola plasma membrane 44.8 48.87
CDX91325 Canola cytosol, mitochondrion 20.48 48.48
CDY38792 Canola plastid 42.88 48.03
CDY11617 Canola plastid 42.88 48.03
CDY42987 Canola plasma membrane 36.0 43.77
CDY02947 Canola plasma membrane 41.92 43.09
CDY65835 Canola plasma membrane 44.32 42.03
CDY21254 Canola plasma membrane 43.36 41.63
CDX91384 Canola plasma membrane 44.64 41.46
CDY02414 Canola plasma membrane 38.24 40.51
CDY55369 Canola plasma membrane 43.36 40.45
CDX76086 Canola plasma membrane 43.36 39.79
CDX90939 Canola plasma membrane 41.44 39.18
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078E8F9EnsemblPlants:CDX98390ProteinID:CDX98390ProteinID:CDX98390.1ncoils:CoilInterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00105971001InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EE3125:
Description
BnaC06g17510D
Coordinates
chrLK031904:+:1032774..1034732
Molecular Weight (calculated)
70503.6 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.165
Length
625 amino acids
Sequence
(BLAST)
001: MSRELTLFEA VLVLFLTLFN NSHGYFLPAG SVGIGFNGYF TLTNTTKHTH GQAFDSEPLS FTNPSTNLTT SFSINFFFAI VPEHNNQGSH GMAFVISPTR
101: GLPGASSDQY LGIFNETTNG KSSNNVIAIE LDIHKDQEFG DIDDNHNLSL ISRNVMRLSI VYSQPDQQLN VTLFPAEISV PPRKPLLSLN QDLSPYLLEE
201: MYLGFTASTG SVGAVHYMMG WFIVGEISYP SLEFGRQPNL PPYPKKASHR TRTVLAVCLT VSVIAAFIAL WFGLVFYLRH KKVKEVLEEW EIQYGPHRFA
301: YKELSNATKG FKEKQLLGRG GFGQVYRGTL PGSDAEIAVK RTSHDSRQGM REFLAEISTI GRLRHPNLVR LLGYCRHKEH LYLVYDFMPN GSLDKYLYRN
401: GENQERLTWE TRFKIIKDVA SALLYLHQEW VQVIIHRDIK PANVLIDHEM NARLGDFGLA KLYDQGFDPQ TSKVAGTFGY IAPELLRTGR ATTSTDVYAF
501: GLVMLEVVCG RRLIERRAVE NEEVLVDWIV ELWEKGEDIL DAAEENIRQE QNRGQVELVL KLGVLCSHQG VSIRPAMSTV MQFLNGVSQL PDNLLDVMRD
601: EKLRGLPETS MEMLLGLNSS TFTHS
Best Arabidopsis Sequence Match ( AT3G59700.1 )
(BLAST)
001: MSRELIILCQ PILVLFLTLF YNSHGYFVSQ GSVGIGFNGY FTLTNTTKHT FGQAFENEHV EIKNSSTGVI SSFSVNFFFA IVPEHNQQGS HGMTFVISPT
101: RGLPGASSDQ YLGIFNKTNN GKASNNVIAI ELDIHKDEEF GDIDDNHVGI NINGLRSVAS ASAGYYDDKD GSFKKLSLIS REVMRLSIVY SQPDQQLNVT
201: LFPAEIPVPP LKPLLSLNRD LSPYLLEKMY LGFTASTGSV GAIHYLMGWL VNGVIEYPRL ELSIPVLPPY PKKTSNRTKT VLAVCLTVSV FAAFVASWIG
301: FVFYLRHKKV KEVLEEWEIQ YGPHRFAYKE LFNATKGFKE KQLLGKGGFG QVYKGTLPGS DAEIAVKRTS HDSRQGMSEF LAEISTIGRL RHPNLVRLLG
401: YCRHKENLYL VYDYMPNGSL DKYLNRSENQ ERLTWEQRFR IIKDVATALL HLHQEWVQVI IHRDIKPANV LIDNEMNARL GDFGLAKLYD QGFDPETSKV
501: AGTFGYIAPE FLRTGRATTS TDVYAFGLVM LEVVCGRRII ERRAAENEEY LVDWILELWE NGKIFDAAEE SIRQEQNRGQ VELVLKLGVL CSHQAASIRP
601: AMSVVMRILN GVSQLPDNLL DVVRAEKFRE WPETSMELLL LDVNTSSSLE LTDSSFVSHG R
Arabidopsis Description
LECRK55L-type lectin-domain containing receptor kinase V.5 [Source:UniProtKB/Swiss-Prot;Acc:Q96285]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.