Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79808 Canola cytosol 87.79 89.11
CDY67595 Canola cytosol 45.21 70.26
AT2G43690.1 Thale cress plasma membrane 76.4 69.73
CDY23392 Canola plasma membrane 74.92 68.79
CDY30434 Canola plasma membrane 74.75 68.64
CDX83467 Canola plasma membrane 59.57 62.46
CDX83466 Canola plasma membrane 64.52 61.09
CDY00641 Canola extracellular 18.65 60.75
CDY71505 Canola plasma membrane 58.75 57.42
CDX98390 Canola plasma membrane 58.75 56.96
CDY00639 Canola cytosol, plasma membrane, vacuole 43.89 55.3
CDY00640 Canola plasma membrane 39.44 54.82
CDY23525 Canola cytosol 33.17 52.34
CDY44249 Canola cytosol 57.26 48.87
CDX84969 Canola cytosol 28.22 46.09
CDY14223 Canola plasma membrane 43.89 45.86
CDY06846 Canola plasma membrane 43.56 44.52
CDY11619 Canola plasma membrane 41.75 44.15
CDX91325 Canola cytosol, mitochondrion 19.14 43.94
CDY38791 Canola plasma membrane 41.09 43.46
CDY11617 Canola plastid 39.6 43.01
CDY38792 Canola plastid 39.6 43.01
CDY02947 Canola plasma membrane 40.26 40.13
CDY21254 Canola plasma membrane 42.24 39.32
CDY65835 Canola plasma membrane 42.57 39.15
CDY42987 Canola plasma membrane 33.17 39.11
CDY55369 Canola plasma membrane 43.23 39.1
CDX97474 Canola extracellular 3.8 38.98
CDX91384 Canola plasma membrane 42.41 38.19
CDX76086 Canola plasma membrane 42.74 38.03
CDX90939 Canola plasma membrane 41.42 37.97
CDY02414 Canola plasma membrane 35.15 36.1
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078JGF4UniProt:A0A078JGF4EnsemblPlants:CDY66693ProteinID:CDY66693ProteinID:CDY66693.1InterPro:ConA-like_dom_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00055582001InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMUniParc:UPI0004EEFA0ASEG:seg:
Description
BnaC04g53070DBnaC04g53070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGF4]
Coordinates
chrLK035410:-:9184..11169
Molecular Weight (calculated)
68387.9 Da
IEP (calculated)
6.268
GRAVY (calculated)
-0.273
Length
606 amino acids
Sequence
(BLAST)
001: MTMSHKILSQ FIFIFVLFCC TDTSHGKLIM EESAGHMNGF TTLTNTKKNS YGQAFNDKPF PFKTSANGSL TSFSFTFFFA IVPEHKNKGS HGMAFVISPT
101: RGIPGASPDQ YLGIFNATNN GESSNQIIAV ELDVHKDDEF GDIDDNHVGV NINGMKSIIS APAGYYDQKG EFKTLSLISG KLLRITILYS HEERRLNVTL
201: SPPDETYHPK RPLLSLNQDL SPYLKEDMYV GFTASTGYIG AIHYMLMWYQ YTLIIVPQLD FAIPIFPPYP MIESQKHKKV LEVLEEWEIE CGPHRFAYSE
301: LFKATNGFKQ ILGEGGFGKV FKGTLPGSET KIAVKRVSRG SSQGMREFLA EVTTIGRLRH PNLVRLLGYC RYKEELYLVY DCMPNGSLDK YLYGSDQEQL
401: SWSQRFKIIK DVASALSYLH HDWLQVVIHR DIKPANVLLD DKMNASLGDF GLAKLHERGH EVQTSRVAGT FGYMAPELVR TGRPTTGTDA VLPDWVVNRW
501: ERGDIEEAAC ERIRQDHDKG ELELLLKLGV LCSHQAEEVR PDMSTVVKIL EGVSELPDNV LDIVRTEKKE KWYENFSEVL DSTMESASNL NVTEPIASLE
601: RTKLLL
Best Arabidopsis Sequence Match ( AT2G43690.3 )
(BLAST)
001: MSMSCKINWL MVLVIIALSN LESSLGRLVF EGSAGLMNGF TTLTNTKKHA YGQAFNDEPF PFKNSVNGNM TSFSFTFFFA IVPEHIDKGS HGIAFVISPT
101: RGIPGASADQ YLGIFNDTND GNSSNHIIAV ELDIHKDDEF GDIDDNHVGI NINGMRSIVS APAGYYDQNG QFKNLSLISG NLLRVTILYS QEEKQLNVTL
201: SPAEEANVPK WPLLSLNKDL SPYLSKNMYI GFTASTGSVG AIHYMWMWYV FTFIIVPKLD FDIPTFPPYP KAESQVKLIV LVTFLTLALF VALAASALIV
301: FFYKRHKKLL EVLEEWEVEC GPHRFSYKEL FNATNGFKQL LGEGGFGPVF KGTLSGSNAK IAVKRVSHDS SQGMRELLAE ISTIGRLRHP NLVRLLGYCR
401: YKEELYLVYD FLPNGSLDKY LYGTSDQKQL SWSQRFKIIK DVASALSYLH HGWIHVVIHR DIKPANVLID DKMNASLGDF GLAKVYDQGY DPQTSRVAGT
501: FGYMAPEIMR TGRPTMGTDV YAFGMFMLEV SCDRKLFEPR AESEEAILTN WAINCWENGD IVEAATERIR QDNDKGQLEL VLKLGVLCSH EAEEVRPDMA
601: TVVKILNGVS ELPDNLLDIV RSEKLENWYE RYSKVIDPVT TEESIGNLAI TEPILPSGRP RLFL
Arabidopsis Description
LECRK53Probable L-type lectin-domain containing receptor kinase V.3 [Source:UniProtKB/Swiss-Prot;Acc:O22834]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.