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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 6
  • vacuole 4
  • plasma membrane 8
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004777.1-P Field mustard cytosol 69.58 77.39
CDY66693 Canola plasma membrane 69.73 76.4
CDX79808 Canola cytosol 68.67 76.38
CDY67595 Canola cytosol 44.43 75.64
AT2G43700.1 Thale cress plasma membrane 69.43 70.06
AT3G59730.1 Thale cress plasma membrane 50.15 63.67
AT3G59700.1 Thale cress plasma membrane 61.45 61.72
AT3G59750.1 Thale cress plasma membrane 56.33 59.74
AT3G59740.1 Thale cress plasma membrane 58.89 59.33
AT1G70110.1 Thale cress plasma membrane 48.64 48.5
AT4G29050.2 Thale cress plasma membrane 49.55 48.17
AT1G70130.1 Thale cress plasma membrane 44.73 45.27
AT2G37710.1 Thale cress plasma membrane 42.47 41.78
AT3G53810.1 Thale cress plasma membrane 42.47 41.65
AT3G55550.1 Thale cress plasma membrane 41.42 40.2
AT4G02410.1 Thale cress plasma membrane 40.21 39.61
AT4G02420.1 Thale cress plasma membrane 39.76 39.46
AT3G45330.1 Thale cress plasma membrane 39.01 37.98
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20EntrezGene:818971UniProt:A0A178VVP0
ProteinID:AAB64037.1ProteinID:AEC10308.1ProteinID:ANM61263.1ArrayExpress:AT2G43690EnsemblPlantsGene:AT2G43690RefSeq:AT2G43690
TAIR:AT2G43690RefSeq:AT2G43690-TAIR-GEnsemblPlants:AT2G43690.1TAIR:AT2G43690.1InterPro:ConA-like_dom_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0030246InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_dom
RefSeq:NP_001318417.1RefSeq:NP_181897.1UniProt:O22834ProteinID:OAP09471.1PFAM:PF00069PFAM:PF00139
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0001016PO:PO:0001017PO:PO:0001078
PO:PO:0001081PO:PO:0004507PO:PO:0007064PO:PO:0007103PO:PO:0007611PO:PO:0007616
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000048656SEG:seg:
Description
LECRK53Probable L-type lectin-domain containing receptor kinase V.3 [Source:UniProtKB/Swiss-Prot;Acc:O22834]
Coordinates
chr2:+:18112109..18114777
Molecular Weight (calculated)
74402.3 Da
IEP (calculated)
5.748
GRAVY (calculated)
-0.077
Length
664 amino acids
Sequence
(BLAST)
001: MSMSCKINWL MVLVIIALSN LESSLGRLVF EGSAGLMNGF TTLTNTKKHA YGQAFNDEPF PFKNSVNGNM TSFSFTFFFA IVPEHIDKGS HGIAFVISPT
101: RGIPGASADQ YLGIFNDTND GNSSNHIIAV ELDIHKDDEF GDIDDNHVGI NINGMRSIVS APAGYYDQNG QFKNLSLISG NLLRVTILYS QEEKQLNVTL
201: SPAEEANVPK WPLLSLNKDL SPYLSKNMYI GFTASTGSVG AIHYMWMWYV FTFIIVPKLD FDIPTFPPYP KAESQVKLIV LVTFLTLALF VALAASALIV
301: FFYKRHKKLL EVLEEWEVEC GPHRFSYKEL FNATNGFKQL LGEGGFGPVF KGTLSGSNAK IAVKRVSHDS SQGMRELLAE ISTIGRLRHP NLVRLLGYCR
401: YKEELYLVYD FLPNGSLDKY LYGTSDQKQL SWSQRFKIIK DVASALSYLH HGWIHVVIHR DIKPANVLID DKMNASLGDF GLAKVYDQGY DPQTSRVAGT
501: FGYMAPEIMR TGRPTMGTDV YAFGMFMLEV SCDRKLFEPR AESEEAILTN WAINCWENGD IVEAATERIR QDNDKGQLEL VLKLGVLCSH EAEEVRPDMA
601: TVVKILNGVS ELPDNLLDIV RSEKLENWYE RYSKVIDPVT TEESIGNLAI TEPILPSGRP RLFL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.