CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38791	Canola	plasma membrane	95.11	95.11
CDX97474	Canola	extracellular	6.98	67.8
CDY42987	Canola	plasma membrane	55.85	62.26
CDY14223	Canola	plasma membrane	60.38	59.66
CDX84969	Canola	cytosol	38.22	59.03
CDY06846	Canola	plasma membrane	61.08	59.02
CDY23525	Canola	cytosol	38.57	57.55
CDY11617	Canola	plastid	51.66	53.05
CDY38792	Canola	plastid	51.48	52.87
CDY00639	Canola	cytosol, plasma membrane, vacuole	38.39	45.74
CDX98390	Canola	plasma membrane	48.87	44.8
CDY71505	Canola	plasma membrane	47.99	44.35
CDX83466	Canola	plasma membrane	48.34	43.28
CDY02414	Canola	plasma membrane	43.46	42.2
CDY23392	Canola	plasma membrane	48.17	41.82
CDY66693	Canola	plasma membrane	44.15	41.75
CDY00640	Canola	plasma membrane	31.76	41.74
CDX79808	Canola	cytosol	43.11	41.37
CDY67595	Canola	cytosol	28.1	41.28
CDY30434	Canola	plasma membrane	47.12	40.91
CDX83467	Canola	plasma membrane	40.84	40.48
CDY21254	Canola	plasma membrane	43.8	38.56
CDY02947	Canola	plasma membrane	39.97	37.66
CDX91384	Canola	plasma membrane	44.15	37.59
CDY65835	Canola	plasma membrane	42.58	37.03
CDY55369	Canola	plasma membrane	42.93	36.72
CDY44249	Canola	cytosol	45.2	36.48
CDX90939	Canola	plasma membrane	41.01	35.55
CDX76086	Canola	plasma membrane	41.36	34.8
CDY00641	Canola	extracellular	10.65	32.8
CDX91325	Canola	cytosol, mitochondrion	14.83	32.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	GO:A0A078FF92	UniProt:A0A078FF92
EnsemblPlants:CDY11619	ProteinID:CDY11619	ProteinID:CDY11619.1	InterPro:ConA-like_dom_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00049742001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Lectin_legB_Mn/Ca_BS	InterPro:Legume_lectin_dom	PFAM:PF00139	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00307	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF75	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEB6E3
SEG:seg	:	:	:	:	:

Description

BnaC06g31200DBnaC06g31200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF92]

Coordinates

chrLK032012:+:523060..525131

Molecular Weight (calculated)

63684.6 Da

IEP (calculated)

6.613

GRAVY (calculated)

-0.041

Length

573 amino acids

Sequence
(BLAST)

001: MFQLIMTLLL FFPKNVVSDP TGGEFNFNGF LYAAGSAHLK SNGLFRLTNT TAQTAGQVFY NYPLRFKDSP NGTVFSFSTT FIFAIASHYG ADNGHGLAFV
101: LCPTRGLSNV DPTQYLGLFN STNMGDPSNH IVAVELDTVQ TAEFNDIDSN HVGIDINSVW IEYESKQKQL NVTLHPLDVS KPKTPLLSLE KDLSPYLLEY
201: MYVGFSSSTG IRTASHYILG WTFKMNGTAP DIDTAHLPEV PRFDQPRDQS VKGVMAITLS LSGITMLIVL ILGLWLFLKR KKLLEVIEDW EVQFGPHRFA
301: YKDLHTATKG FKDTELLGKG GFGKVFKGTL PVSNIEIAVK MVSHDSRQGM REFIAEIATI GRLRHPNLVR LLGYCRRKGE LYLVYDCMPK GSLDKFLYHQ
401: QNGNLDWSKS YLEGTLGYIS PELSRTGKAS TSSDVFAFGV VMLEIACGRK PVLPRASESE MVLTDWVLEC WENGDILQVV DQRIGQEYIE EQVKLVLKLG
501: LLCSHPVAAI RPNMSSIIQF LDSVAQLPHN LLDIMSAQEI NRGAQISCEA GNSPQSSSLA SLTFTESFVS HGR

Best Arabidopsis Sequence Match ( AT1G70110.1 )
(BLAST)

001: MVLLLFLVLF FVPESVVCQR PNPNGVEFNT SGNMYTSGSA YINNNGLIRL TNSTPQTTGQ VFYNDQLRFK NSVNGTVSSF STTFVFSIEF HNGIYGGYGI
101: AFVICPTRDL SPTFPTTYLG LFNRSNMGDP KNHIVAVELD TKVDQQFEDK DANHVGIDIN TLVSDTVALA GYYMDNGTFR SLLLNSGQPM QIWIEYDSKQ
201: KQINVTLHPL YVPKPKIPLL SLEKDLSPYL LELMYVGFTS TTGDLTASHY ILGWTFKMNG TTPDIDPSRL PKIPRYNQPW IQSPNGILTI SLTVSGVIIL
301: IILSLSLWLF LKRKKLLEVL EDWEVQFGPH RFAFKDLHIA TKGFKDTEVL GKGGFGKVYK GTLPVSNVEI AVKMVSHDSR QGMREFIAEI ATIGRLRHPN
401: LVRLQGYCRH KGELYLVYDC MAKGSLDKFL YHQQTGNLDW SQRFKIIKDV ASGLYYLHQQ WVQVIIHRDI KPANILLDAN MNAKLGDFGL AKLCDHGTDP
501: QTSHVAGTLG YISPELSRTG KASTRSDVFA FGIVMLEIAC GRKPILPRAS QREMVLTDWV LECWENEDIM QVLDHKIGQE YVEEQAALVL KLGLFCSHPV
601: AAIRPNMSSV IQLLDSVAQL PHNLLDIVQT REVHRGTEIS GEAADSPESC SIAPLTFTES FVSHGR

Arabidopsis Description

LECRK51Putative L-type lectin-domain containing receptor kinase V.1 [Source:UniProtKB/Swiss-Prot;Acc:O04534]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.