CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97474	Canola	extracellular	13.48	84.75
CDY14223	Canola	plasma membrane	89.22	57.07
CDY06846	Canola	plasma membrane	78.71	49.24
CDY23525	Canola	cytosol	50.13	48.44
AT4G29050.2	Thale cress	plasma membrane	87.87	47.73
CDY11617	Canola	plastid	70.89	47.13
CDY38792	Canola	plastid	70.89	47.13
CDY67595	Canola	cytosol	45.01	42.82
CDY00640	Canola	plasma membrane	49.06	41.74
CDY42987	Canola	plasma membrane	56.33	40.66
CDY00639	Canola	cytosol, plasma membrane, vacuole	50.13	38.67
CDY11619	Canola	plasma membrane	59.03	38.22
CDY38791	Canola	plasma membrane	57.68	37.35
CDX91325	Canola	cytosol, mitochondrion	25.07	35.23
CDX98390	Canola	plasma membrane	51.75	30.72
CDX83466	Canola	plasma membrane	52.56	30.47
CDX83467	Canola	plasma membrane	46.63	29.93
CDY71505	Canola	plasma membrane	49.87	29.84
CDY23392	Canola	plasma membrane	52.29	29.39
CDY30434	Canola	plasma membrane	52.02	29.24
CDX79808	Canola	cytosol	45.82	28.48
CDY66693	Canola	plasma membrane	46.09	28.22
CDY02947	Canola	plasma membrane	45.01	27.47
CDY44249	Canola	cytosol	52.29	27.32
CDY21254	Canola	plasma membrane	47.71	27.19
CDX91384	Canola	plasma membrane	49.06	27.04
CDY65835	Canola	plasma membrane	45.82	25.8
CDY55369	Canola	plasma membrane	46.36	25.67
CDX90939	Canola	plasma membrane	45.55	25.57
CDX76086	Canola	plasma membrane	46.63	25.4
CDY02414	Canola	plasma membrane	39.08	24.58
CDY00641	Canola	extracellular	3.5	6.99

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:3.30.200.20	GO:A0A078D9M3
EnsemblPlants:CDX84969	ProteinID:CDX84969	ProteinID:CDX84969.1	InterPro:ConA-like_dom_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00142358001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF75	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF2BAC	:	:

Description

BnaC05g20860D

Coordinates

chrLK031839:+:808672..810216

Molecular Weight (calculated)

41465.7 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.169

Length

371 amino acids

Sequence
(BLAST)

001: MDDNHVGIDT NSLISEKAAS AGSLLSSHYI LGWTFKLNGK ASDIDPSRLP KLPDDYQEIL VFLTISFMLF LKRKKLMEVL EDWEVQFGPH RFAYKDLYIA
101: TKGFKNSELL GKGGFGKVYK GTLLSSNLDI AVKKVSHDSR QGMREFIAEI ATIGRLRHPN LFLYHQPEQS LDWSQRFKII KDVASGLCYL HQQWVQLIIH
201: RDIKPANILL DESMNAKLGD FGLAKLCEHG IDPQTSNVAG TFGYISPELS RTGKASTSSD VFAFGVFMLE ITCGRRPVLP RASSPSEMVL TDWVLDCWGE
301: DILQVVDERV KHDDKYLVEQ FLDGVAQLPH NLLDIVKARE NVGTTEATAS PAQPSSIATV TFTESFASHG R

Best Arabidopsis Sequence Match ( AT1G70110.1 )
(BLAST)

001: MVLLLFLVLF FVPESVVCQR PNPNGVEFNT SGNMYTSGSA YINNNGLIRL TNSTPQTTGQ VFYNDQLRFK NSVNGTVSSF STTFVFSIEF HNGIYGGYGI
101: AFVICPTRDL SPTFPTTYLG LFNRSNMGDP KNHIVAVELD TKVDQQFEDK DANHVGIDIN TLVSDTVALA GYYMDNGTFR SLLLNSGQPM QIWIEYDSKQ
201: KQINVTLHPL YVPKPKIPLL SLEKDLSPYL LELMYVGFTS TTGDLTASHY ILGWTFKMNG TTPDIDPSRL PKIPRYNQPW IQSPNGILTI SLTVSGVIIL
301: IILSLSLWLF LKRKKLLEVL EDWEVQFGPH RFAFKDLHIA TKGFKDTEVL GKGGFGKVYK GTLPVSNVEI AVKMVSHDSR QGMREFIAEI ATIGRLRHPN
401: LVRLQGYCRH KGELYLVYDC MAKGSLDKFL YHQQTGNLDW SQRFKIIKDV ASGLYYLHQQ WVQVIIHRDI KPANILLDAN MNAKLGDFGL AKLCDHGTDP
501: QTSHVAGTLG YISPELSRTG KASTRSDVFA FGIVMLEIAC GRKPILPRAS QREMVLTDWV LECWENEDIM QVLDHKIGQE YVEEQAALVL KLGLFCSHPV
601: AAIRPNMSSV IQLLDSVAQL PHNLLDIVQT REVHRGTEIS GEAADSPESC SIAPLTFTES FVSHGR

Arabidopsis Description

LECRK51Putative L-type lectin-domain containing receptor kinase V.1 [Source:UniProtKB/Swiss-Prot;Acc:O04534]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.