Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 5
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000320.1-P Field mustard plasma membrane 99.69 96.81
AT2G43700.1 Thale cress plasma membrane 80.0 77.81
CDY44249 Canola cytosol 85.78 77.32
CDX83467 Canola plasma membrane 68.28 75.61
CDY67595 Canola cytosol 42.5 69.74
CDY23392 Canola plasma membrane 70.16 68.03
CDY30434 Canola plasma membrane 69.69 67.58
CDY00639 Canola cytosol, plasma membrane, vacuole 48.91 65.07
CDY66693 Canola plasma membrane 61.09 64.52
CDX79808 Canola cytosol 60.16 64.49
CDX98390 Canola plasma membrane 62.66 64.16
CDY71505 Canola plasma membrane 62.03 64.03
CDY00640 Canola plasma membrane 42.03 61.7
CDY00641 Canola extracellular 16.25 55.91
CDY23525 Canola cytosol 32.19 53.65
CDX84969 Canola cytosol 30.47 52.56
CDY14223 Canola plasma membrane 44.84 49.48
CDY06846 Canola plasma membrane 45.0 48.57
CDY11619 Canola plasma membrane 43.28 48.34
CDY38791 Canola plasma membrane 43.12 48.17
CDY11617 Canola plastid 41.88 48.03
CDY38792 Canola plastid 41.72 47.85
CDX91325 Canola cytosol, mitochondrion 19.69 47.73
CDX97474 Canola extracellular 4.22 45.76
CDY02947 Canola plasma membrane 41.09 43.26
CDY42987 Canola plasma membrane 34.69 43.19
CDY65835 Canola plasma membrane 42.5 41.27
CDY55369 Canola plasma membrane 43.12 41.19
CDY21254 Canola plasma membrane 41.41 40.71
CDX91384 Canola plasma membrane 42.34 40.27
CDX76086 Canola plasma membrane 42.5 39.94
CDY02414 Canola plasma membrane 35.78 38.81
CDX90939 Canola plasma membrane 39.84 38.58
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20
GO:A0A078D265EnsemblPlants:CDX83466ProteinID:CDX83466ProteinID:CDX83466.1InterPro:ConA-like_dom_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00139044001InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_dom
PFAM:PF00069PFAM:PF00139ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007
PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEB7FDSEG:seg:
Description
BnaA03g20400D
Coordinates
chrLK031832:-:1653267..1655246
Molecular Weight (calculated)
72575.2 Da
IEP (calculated)
7.173
GRAVY (calculated)
-0.211
Length
640 amino acids
Sequence
(BLAST)
001: MSRKLDWWMV MLIIALTNTK NSHCKLHAYG QAFDDEILTF KNNFTNGTVP SFSVSFFFAI VPEHKHKGSH GMAFVISPTR GTPGASADQY LGIFNKSNNG
101: NISNHIIAVE LDIHKDEEFG DVDDNHVGIN INGMESIDSH PAGYYDQDGQ FRNLSLISGK LLRVTILYSQ EKKQLNVTLS SPEEAYHPDR PLLSLNQDLS
201: PYVLENMYVG FSASTGLVGA MHYMWSWFFT YGLSVHELDF PIPTFPPYPN PKSQVKRTTM VTFSTILLFI ALVASALSIF FYKRHKMVKE VLEEWEIQCG
301: PHRFSYKELF KATKGFSDKQ LLGKGGFGQV FKGTLPGSDT EIAVKRISHD SRQGMQEFLA EISTIGRLRH QNLVRLQGYC RYKEQLYLVY DFMPNGSLDK
401: YLYRRGNQEP LTWNQRFKII KDVAYALCYL HHEWGQVVIH RDIKPANVLI DHHMHARLGD FGLAKLYDQG FVPHTSRVIG TIGYIAPELI RSGRATTGTD
501: VYAFGLFMLE VSCGRRLIEP RAPSNEAVLA EWTLECWESG DILEAASERL RGEQDREQVE LVLKLGVLCS HQVATIRPDM SKVIKILNCD VQLPDNLLDI
601: VKAEKIRVWS ETSERALGVL NTQMSIGTLT LTEPFTSHGR
Best Arabidopsis Sequence Match ( AT2G43700.1 )
(BLAST)
001: MSRTIGSRVI FLILALFCCT ENSRGKLVMQ GSAGFFKGYR TLTSTKKHAY GQAFEDEIVP FKNSANDTVT SFSVTFFFAI APEDKHKGAH GMAFVISPTR
101: GITGASADQY LGIFNKANNG DSSNHVIAVE LDINKDEEFG DINDNHVGIN INGMRSIKFA PAGYYDQEGQ FKDLSLISGS LLRVTILYSQ MEKQLNVTLS
201: SPEEAYYPNK PLLSLNQDLS PYILENMYVG FSASTGSVRA MHYMLSWFVH GGVDVPNLDL GIPTFPPYPK EKSLVYRIVL VTSLALVLFV ALVASALSIF
301: FYRRHKKVKE VLEEWEIQCG PHRFAYKELF KATKGFKQLL GKGGFGQVFK GTLPGSDAEI AVKRISHDSK QGMQEFLAEI STIGRLRHQN LVRLQGYCRY
401: KEELYLVYDF MPNGSLDKYL YHRANQEQLT WNQRFKIIKD IASALCYLHH EWVQVVIHRD IKPANVLIDH QMNARLGDFG LAKLYDQGYD PQTSRVAGTF
501: WYIAPELIRS GRATTGTDVY AFGLFMLEVS CGRRLIERRT ASDEVVLAEW TLKCWENGDI LEAVNDGIRH EDNREQLELV LKLGVLCSHQ AVAIRPDMSK
601: VVQILGGDLQ LPDNLLDIVK AEKVRMWSET SESVLGVLTS QGSIGTLTLT EPFTSRGR
Arabidopsis Description
LECRK54L-type lectin-domain containing receptor kinase V.4 [Source:UniProtKB/Swiss-Prot;Acc:O22833]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.