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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00639 Canola cytosol, plasma membrane, vacuole 76.15 69.02
CDY71505 Canola plasma membrane 75.69 53.23
CDX98390 Canola plasma membrane 76.15 53.12
AT3G59750.1 Thale cress plasma membrane 74.54 51.92
Bra033984.1-P Field mustard plasma membrane 78.44 51.9
CDY67595 Canola cytosol 45.87 51.28
CDX97474 Canola extracellular 6.88 50.85
CDX84969 Canola cytosol 41.74 49.06
AT3G59740.1 Thale cress plasma membrane 73.85 48.86
CDX91325 Canola cytosol, mitochondrion 29.36 48.48
AT3G59730.1 Thale cress plasma membrane 52.75 43.98
CDX83466 Canola plasma membrane 61.7 42.03
CDX83467 Canola plasma membrane 55.5 41.87
CDY23525 Canola cytosol 36.24 41.15
CDX79808 Canola cytosol 56.19 41.04
CDY11617 Canola plastid 52.06 40.68
CDY38792 Canola plastid 51.83 40.5
CDY23392 Canola plasma membrane 61.24 40.45
CDY30434 Canola plasma membrane 61.24 40.45
CDY66693 Canola plasma membrane 54.82 39.44
CDY44249 Canola cytosol 61.01 37.46
CDY14223 Canola plasma membrane 46.56 35.0
CDY06846 Canola plasma membrane 46.1 33.9
CDY11619 Canola plasma membrane 41.74 31.76
CDY42987 Canola plasma membrane 37.39 31.71
CDY02947 Canola plasma membrane 43.58 31.25
CDY38791 Canola plasma membrane 41.05 31.24
CDX76086 Canola plasma membrane 45.87 29.37
CDY65835 Canola plasma membrane 43.35 28.68
CDY21254 Canola plasma membrane 42.66 28.57
CDX91384 Canola plasma membrane 43.81 28.38
CDY55369 Canola plasma membrane 42.43 27.61
CDY02414 Canola plasma membrane 36.7 27.12
CDX90939 Canola plasma membrane 41.05 27.08
CDY00641 Canola extracellular 0.0 0.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1Gene3D:1.10.510.10MapMan:18.4.1.19Gene3D:3.30.200.20GO:A0A078EEZ8
EnsemblPlants:CDY00640ProteinID:CDY00640ProteinID:CDY00640.1InterPro:ConA-like_dom_sfGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00110459001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EE3CAC:
Description
BnaC04g22850D
Coordinates
chrLK031920:-:1184545..1185855
Molecular Weight (calculated)
49372.6 Da
IEP (calculated)
7.731
GRAVY (calculated)
-0.091
Length
436 amino acids
Sequence
(BLAST)
001: MYFGFTASTG YTGALHYMLV MFGSGDTGSL QRDLNAIPIL PPYPKKSFDR TRTVLAVCLA VSVIAVFIAS WIGFVFYLRH KKVQGVLEEW EIQYGPHRFA
101: YKELFNATKG FKDKKILGRG GFGQVYRGTL SGSDVDIAVK RISHGSSQGK SEFLAEISTI GRLRHPNLVR LLGYCRHKED LFLVYDFMPN GSLDKYLNHS
201: NTNENQERLS WDQRFKIIKD VASPLLYLHQ EWVQIIIHRD IKPANILIDH EMNARLGDFG LAKLYDQGID PQTSKVAGAF GYIAPEFLRT GRATTSTDVY
301: AFGLVILEVV CGRRLIERRQ ARNEEVLVDW ILELWENGKI FDAVEESIVQ VEQNRGEIEL VLKLGVLCSH QAESIRPDMS TVMGLLNGVL HLPDNFLDVV
401: RAENLRGRHE ISVEVLLDIY SLSRLTFTHS STSLGR
Best Arabidopsis Sequence Match ( AT2G43700.3 )
(BLAST)
001: MMPDSQGSAG FFKGYRTLTS TKKHAYGQAF EDEIVPFKNS ANDTVTSFSV TFFFAIAPED KHKGAHGMAF VISPTRGITG ASADQYLGIF NKANNGDSSN
101: HVIAVELDIN KDEEFGDIND NHVGININGM RSIKFAPAGY YDQEGQFKDL SLISGSLLRV TILYSQMEKQ LNVTLSSPEE AYYPNKPLLS LNQDLSPYIL
201: ENMYVGFSAS TGSVRAMHYM LSWFVHGGVD VPNLDLGIPT FPPYPKEKSL VYRIVLVTSL ALVLFVALVA SALSIFFYRR HKKVKEVLEE WEIQCGPHRF
301: AYKELFKATK GFKQLLGKGG FGQVFKGTLP GSDAEIAVKR ISHDSKQGMQ EFLAEISTIG RLRHQNLVRL QGYCRYKEEL YLVYDFMPNG SLDKYLYHRA
401: NQEQLTWNQR FKIIKDIASA LCYLHHEWVQ VVIHRDIKPA NVLIDHQMNA RLGDFGLAKL YDQGYDPQTS RVAGTFWYIA PELIRSGRAT TGTDVYAFGL
501: FMLEVSCGRR LIERRTASDE VVLAEWTLKC WENGDILEAV NDGIRHEDNR EQLELVLKLG VLCSHQAVAI RPDMSKVVQI LGGDLQLPDN LLDIVKAEKV
601: RMWSETSESV LGVLTSQGSI GTLTLTEPFT SRGR
Arabidopsis Description
LECRK54L-type lectin-domain containing receptor kinase V.4 [Source:UniProtKB/Swiss-Prot;Acc:O22833]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.