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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83466 Canola plasma membrane 77.32 85.78
CDX83467 Canola plasma membrane 57.89 71.11
AT2G43700.1 Thale cress plasma membrane 64.93 70.06
CDY67595 Canola cytosol 37.18 67.69
CDY00639 Canola cytosol, plasma membrane, vacuole 42.96 63.41
CDY00640 Canola plasma membrane 37.46 61.01
CDY23392 Canola plasma membrane 56.34 60.61
CDY30434 Canola plasma membrane 56.06 60.3
CDX79808 Canola cytosol 50.42 59.97
CDY71505 Canola plasma membrane 50.56 57.9
CDX98390 Canola plasma membrane 50.42 57.28
CDY66693 Canola plasma membrane 48.87 57.26
CDY23525 Canola cytosol 29.01 53.65
CDX84969 Canola cytosol 27.32 52.29
CDX97474 Canola extracellular 3.94 47.46
CDY11617 Canola plastid 36.76 46.77
CDY38792 Canola plastid 36.62 46.59
CDX91325 Canola cytosol, mitochondrion 17.32 46.59
CDY14223 Canola plasma membrane 37.46 45.86
CDY11619 Canola plasma membrane 36.48 45.2
CDY06846 Canola plasma membrane 37.46 44.86
CDY38791 Canola plasma membrane 36.2 44.85
CDY42987 Canola plasma membrane 30.85 42.61
CDY02947 Canola plasma membrane 34.65 40.46
CDY00641 Canola extracellular 10.14 38.71
CDY65835 Canola plasma membrane 35.07 37.78
CDY55369 Canola plasma membrane 35.49 37.61
CDX91384 Canola plasma membrane 35.49 37.44
CDX76086 Canola plasma membrane 35.77 37.3
CDY21254 Canola plasma membrane 34.08 37.17
CDX90939 Canola plasma membrane 32.68 35.1
CDY02414 Canola plasma membrane 29.15 35.08
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20GO:A0A078I3W4UniProt:A0A078I3W4EnsemblPlants:CDY44249
ProteinID:CDY44249ProteinID:CDY44249.1InterPro:ConA-like_dom_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00079756001
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Legume_lectin_domPFAM:PF00069PFAM:PF00139PIRSF:PIRSF000641
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF75InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220InterPro:SRK-like_kinaseSUPFAM:SSF49899SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI0004EDFF16SEG:seg:::
Description
BnaC03g24410DBnaC03g24410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3W4]
Coordinates
chrLK032583:+:188818..192320
Molecular Weight (calculated)
80733.3 Da
IEP (calculated)
6.740
GRAVY (calculated)
-0.211
Length
710 amino acids
Sequence
(BLAST)
001: MNARLGDFGL AKLYDQGFDP QTSRVAGNLG RLIEPRGATN KVVIVEWTLE CWKNGDILEA SNERLRQEHN REQLELVLIL GVLCSHQVPG VRPDMLKVVQ
101: ILNGNLQLPD NLLDIVKAEK VRMWSETSER VVDVLTSQCF VRTLAFAEPF RIPDASADQY LGIFNKANNG NISNHIIAVE LDIHKDEEFG DVDDNHVGIN
201: INGMRSIDSH PAGYYDQDGQ FRNISLISGK LLRVTILYSQ DKKQLNVTLS SPEEAYHPDR PLLSLNRDLS PFVLEKMYVG FSASTGMVGA MHYLWSRFFT
301: YDLNVHELDF PIPTFPPYPN PKSQVKRTVM VTFLTILLFI ALVASALSIF FYKKHKMVKE VLEEWEIQCG PHRFSYKELF KATKGFSDKQ LLGKGGFGQV
401: FKGTLPGSDT EIAVKRISHD SRQGMQEFLA EISTIGRLRH QNLVRLQGYC RYKEQLYLVY DFMPNGSLDK YLYRRGNQEP LTWNQRFKII KDVAYALCYL
501: HHEWGQVVIH RDIKPANVLI DHHMDARLGD FGLAKLYDQG FDPHTSRVIG TIGYIAPELI RSGRATTGTD VYVFGLFMLE VSCGRRLIEP RAPSNEAVLA
601: EWTLECWESG DILEAASERL HAEQDREQVE LVMKLGVLCS HQVATIRRDM SKVIKILNCD VQIPDNLLDI VKAEKIRVWS EISERALGVL NTQMSIGTLT
701: LTEPFTSHGR
Best Arabidopsis Sequence Match ( AT2G43700.1 )
(BLAST)
001: MSRTIGSRVI FLILALFCCT ENSRGKLVMQ GSAGFFKGYR TLTSTKKHAY GQAFEDEIVP FKNSANDTVT SFSVTFFFAI APEDKHKGAH GMAFVISPTR
101: GITGASADQY LGIFNKANNG DSSNHVIAVE LDINKDEEFG DINDNHVGIN INGMRSIKFA PAGYYDQEGQ FKDLSLISGS LLRVTILYSQ MEKQLNVTLS
201: SPEEAYYPNK PLLSLNQDLS PYILENMYVG FSASTGSVRA MHYMLSWFVH GGVDVPNLDL GIPTFPPYPK EKSLVYRIVL VTSLALVLFV ALVASALSIF
301: FYRRHKKVKE VLEEWEIQCG PHRFAYKELF KATKGFKQLL GKGGFGQVFK GTLPGSDAEI AVKRISHDSK QGMQEFLAEI STIGRLRHQN LVRLQGYCRY
401: KEELYLVYDF MPNGSLDKYL YHRANQEQLT WNQRFKIIKD IASALCYLHH EWVQVVIHRD IKPANVLIDH QMNARLGDFG LAKLYDQGYD PQTSRVAGTF
501: WYIAPELIRS GRATTGTDVY AFGLFMLEVS CGRRLIERRT ASDEVVLAEW TLKCWENGDI LEAVNDGIRH EDNREQLELV LKLGVLCSHQ AVAIRPDMSK
601: VVQILGGDLQ LPDNLLDIVK AEKVRMWSET SESVLGVLTS QGSIGTLTLT EPFTSRGR
Arabidopsis Description
LECRK54L-type lectin-domain containing receptor kinase V.4 [Source:UniProtKB/Swiss-Prot;Acc:O22833]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.