Factsheet for VIT_13s0019g02040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069794	Potato	plasma membrane	70.54	69.42
Solyc05g053010.1.1	Tomato	plasma membrane	69.51	68.41
VIT_08s0007g00830.t01	Wine grape	plasma membrane	68.63	67.34
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	49.04	62.83
KRH31001	Soybean	plasma membrane	61.12	61.3
CDY02947	Canola	plasma membrane	54.49	60.86
Bra003216.1-P	Field mustard	cytosol	57.44	60.47
AT3G55550.1	Thale cress	plasma membrane	59.65	59.21
CDX76086	Canola	plasma membrane	58.17	58.0
Bra014736.1-P	Field mustard	plasma membrane	58.03	57.86
Os12t0574700-00	Rice	plasma membrane	56.7	56.12
TraesCS5B01G084800.1	Wheat	plasma membrane	57.0	55.84
TraesCS5D01G091000.1	Wheat	plasma membrane	56.7	55.56
TraesCS5A01G081600.1	Wheat	plasma membrane	56.85	55.54
Zm00001d030759_P001	Maize	plasma membrane	55.82	54.93
HORVU5Hr1G020530.1	Barley	plasma membrane	57.29	54.87
EES17246	Sorghum	plasma membrane	55.96	54.83
VIT_06s0004g05170.t01	Wine grape	plasma membrane	52.87	53.19
VIT_08s0007g00810.t01	Wine grape	plasma membrane	52.58	52.5
VIT_13s0067g01640.t01	Wine grape	vacuole	49.34	49.78
VIT_13s0067g01590.t01	Wine grape	plasma membrane, vacuole	48.31	48.66
VIT_12s0055g00500.t01	Wine grape	plasma membrane	45.8	48.22

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100263312	wikigene:100263312	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20
ProteinID:CCB56323	ProteinID:CCB56323.1	InterPro:ConA-like_dom_sf	UniProt:F6HNV3	EMBL:FN595998	GO:GO:0000166
GO:GO:0002229	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	GO:GO:0042742
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100263312	wikigene:LOC100263312	InterPro:Legume_lectin_dom	PFAM:PF00069
PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF27
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TIGR:TC70781	TMHMM:TMhelix	UniParc:UPI00015C9867	ArrayExpress:VIT_13s0019g02040	EnsemblPlantsGene:VIT_13s0019g02040
EnsemblPlants:VIT_13s0019g02040.t01	unigene:Vvi.16734	RefSeq:XP_002278015	RefSeq:XP_002278015.1	SEG:seg	:

Description

No Description!

Coordinates

chr13:-:3340757..3343141

Molecular Weight (calculated)

75267.7 Da

IEP (calculated)

6.711

GRAVY (calculated)

-0.125

Length

679 amino acids

Sequence
(BLAST)

001: MAEALKLFWV FVFFLSNPVL SQLDEFFYDS FHGAGNNLSL NGVAKIEKNG MLRLTNDVAR WFGRGFYPSP IRFKNSSGGK AFSFSTAFAF AIVPQYPTLG
101: GHGLAFAITS TKELPGALPR QYLGLLNATD NGNSTNHVFA VEFDTVQDFE FNDISDNHVG IDLNSMTSYA SANASYFSDN STKEYLNLKG GKTIQAWIDY
201: DGQRDQLNVF LSPHSTKPTS PILSCGVNLS SILKEFMYVG FSASTGLLAS SHYVLGWRFK MNGVAESLDL SSLPKLPGPK RNNTPLIIGV SVAATSMIVF
301: AVALAFYLIR KIKNADVIEA WELDIGPHRF SYQELKKATR GFRDKELIGF GGFGKVYKGT LRNSNTQVAV KRISHESKQG MREFVSEIAS IGRLRHRNLV
401: QLLGWCRRRG DLLLVYDYMP NGSLDKYLFD TSKSTLSWEQ RFKIIKGVAS GLLYLHEEWE QTVIHRDIKA GNILLDSELN GRLGDFGLAK LYEHGSNPST
501: TRVVGTLGYL APELTRTGKP TRSSDVFAFG ALLLEVVCGR RPVEAKALPE ELILVDWVWE RWREGAILDV VDPRLKGEYD EVEVVVVLKL GLMCSNNSPA
601: VRPSMRQVLR YLEGEVALPE ELSAPDAYDK KGGGAGDGFE FEDYVHSYPA SSCFEKVSTW SSAVDDVDVE SSSVSPLVT

Best Arabidopsis Sequence Match ( AT3G55550.1 )
(BLAST)

001: MSQTFAVILL LLIFLTHLVS SLIQDFSFIG FKKASPNLTL NGVAEIAPTG AIRLTTETQR VIGHAFYSLP IRFKPIGVNR ALSFSTSFAI AMVPEFVTLG
101: GHGLAFAITP TPDLRGSLPS QYLGLLNSSR VNFSSHFFAV EFDTVRDLEF EDINDNHVGI DINSMESSIS TPAGYFLANS TKKELFLDGG RVIQAWIDYD
201: SNKKRLDVKL SPFSEKPKLS LLSYDVDLSS VLGDEMYVGF SASTGLLASS HYILGWNFNM SGEAFSLSLP SLPRIPSSIK KRKKKRQSLI LGVSLLCSLL
301: IFAVLVAASL FVVRKVKDED RVEEWELDFG PHRFSYRELK KATNGFGDKE LLGSGGFGKV YKGKLPGSDE FVAVKRISHE SRQGVREFMS EVSSIGHLRH
401: RNLVQLLGWC RRRDDLLLVY DFMPNGSLDM YLFDENPEVI LTWKQRFKII KGVASGLLYL HEGWEQTVIH RDIKAANVLL DSEMNGRVGD FGLAKLYEHG
501: SDPGATRVVG TFGYLAPELT KSGKLTTSTD VYAFGAVLLE VACGRRPIET SALPEELVMV DWVWSRWQSG DIRDVVDRRL NGEFDEEEVV MVIKLGLLCS
601: NNSPEVRPTM RQVVMYLEKQ FPSPEVVPAP DFLDANDSMC LDERSGSAGE FEDFVDSARF YSGPNETTTS SIFSFSGKTR TDPR

Arabidopsis Description

LECRKS4L-type lectin-domain containing receptor kinase S.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2S4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.