CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g00500.t01	Wine grape	plasma membrane	61.41	63.41
KRH00017	Soybean	plasma membrane	45.65	45.1
KRH49147	Soybean	plasma membrane	45.35	44.87
KRH00016	Soybean	plasma membrane	42.79	42.73
KRH49145	Soybean	plasma membrane	42.64	42.58
KRH75684	Soybean	plasma membrane	43.69	42.36
KRH31001	Soybean	plasma membrane	42.64	41.95
TraesCS1A01G184400.1	Wheat	plasma membrane	42.64	41.89
TraesCS4D01G288200.1	Wheat	plasma membrane	42.04	41.67
KRH65893	Soybean	plasma membrane	36.79	41.6
Os10t0533800-00	Rice	plasma membrane	43.39	41.4
TraesCS4B01G289100.1	Wheat	plasma membrane	41.89	41.03
PGSC0003DMT400068512	Potato	plasma membrane	41.14	40.71
Zm00001d043781_P001	Maize	plasma membrane	40.99	40.62
EER94566	Sorghum	plasma membrane	41.14	40.47
KRH65884	Soybean	plasma membrane	43.54	40.33
Solyc09g005000.1.1	Tomato	plasma membrane	40.09	39.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	EMBL:ACUP02004791	InterPro:ConA-like_dom_sf
EnsemblPlantsGene:GLYMA_08G075200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0030246	UniProt:I1KR60	InterPro:IPR000719	EnsemblPlants:KRH42204	ProteinID:KRH42204	ProteinID:KRH42204.1
InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069	PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF45	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002339120
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:5745065..5747419

Molecular Weight (calculated)

73907.8 Da

IEP (calculated)

6.985

GRAVY (calculated)

-0.106

Length

666 amino acids

Sequence
(BLAST)

001: MAMHAFGILL GVLYSLLSFV SSDINFVKYG FKQAGLKMDG ASYVRPNGIL TLINDSPKIL GHAFYPSPLP FKSSKNKSIV ATFSTTFVFS IVPKYPELGA
101: QGFAFVLIST NKPKGCLMNQ YLGLPNVTSS LEFSTRFLAI EFDGIQNLDL HDMNDNHVGI DISSLISNIS RPVAYYLSDH SKNISFSLKS GKPIQAWVDY
201: NEGEMLMNVT VSPFGMPKPY FPLISFPIDL SLVLNDYMYA GFSASNGLLV AEHNIHGWGF KIGEAGQELD KSAVPLIGSS TSTSSKVVHK KDFAVGITLT
301: SATLFILTVI GAFHVLRRLR NGDEILEDWE LEFASHKFKY SELHSATGKF GDSNLIGYGG FGKVYRGVIA STGLEVAVKR VAPDSRQGIR EFVSEITSMA
401: QLKHRNLVQL HGWCRKKDEL LIVYNYVPNG SLDKLLFENE HQKKKLLTWD QRYTIITGVA QGLLYLHEEC ELQVVHRDVK PSNVLIDEDL QPKLGDFGLA
501: RTYEHGINPQ TTNVVGTLGY MAPELTKTGK ARTSTDVYGY GILILEVACG RKPIEPQKNP EELVLVDWVR ELHHQGKISR AIDPSLDEYD KDEARLVLSL
601: GLFCAHPNPD YRPSMRRIVQ FLLGETSLPP LPPDIHCEDP TAIRKCPNNF ADDSGSSSSM VSSSKY

Best Arabidopsis Sequence Match ( AT3G53810.1 )
(BLAST)

001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR

Arabidopsis Description

LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.