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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 10
  • golgi 5
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:cytosol, extracellular, nucleus, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G02410.1 Os01t0267900-01 AT2G41090.1 17360592
AT4G02410.1 Os01t0279300-01 AT2G41090.1 17360592
AT4G02410.1 Os01t0810300-01 AT2G41090.1 17360592
AT4G02410.1 Os03t0319300-01 AT2G41090.1 17360592
AT4G02410.1 Os05t0491000-01 AT2G41090.1 17360592
AT4G02410.1 Os05t0491100-01 AT2G41090.1 17360592
AT4G02410.1 Os07t0687200-02 AT2G41090.1 17360592
AT4G02410.1 Os12t0603800-00 AT2G41090.1 17360592
AT4G02410.1 Os01t0267900-01 AT2G41100.1 17360592
AT4G02410.1 Os01t0279300-01 AT2G41100.1 17360592
AT4G02410.1 Os01t0810300-01 AT2G41100.1 17360592
AT4G02410.1 Os03t0319300-01 AT2G41100.1 17360592
AT4G02410.1 Os05t0491000-01 AT2G41100.1 17360592
AT4G02410.1 Os05t0491100-01 AT2G41100.1 17360592
AT4G02410.1 Os07t0687200-02 AT2G41100.1 17360592
AT4G02410.1 Os12t0603800-00 AT2G41100.1 17360592
AT4G02410.1 Os03t0743500-02 AT4G14640.1 17360592
AT4G02410.1 Os01t0267900-01 AT5G21274.1 17360592
AT4G02410.1 Os01t0279300-01 AT5G21274.1 17360592
AT4G02410.1 Os01t0810300-01 AT5G21274.1 17360592
AT4G02410.1 Os03t0319300-01 AT5G21274.1 17360592
AT4G02410.1 Os05t0491000-01 AT5G21274.1 17360592
AT4G02410.1 Os05t0491100-01 AT5G21274.1 17360592
AT4G02410.1 Os07t0687200-02 AT5G21274.1 17360592
AT4G02410.1 Os12t0603800-00 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0283050-00 Rice plasma membrane 61.83 61.73
KXG24408 Sorghum plasma membrane 60.33 60.78
Os07t0130100-01 Rice plasma membrane 61.38 60.21
TraesCS2D01G130600.1 Wheat plasma membrane 59.58 59.76
TraesCS2A01G127900.1 Wheat plasma membrane 59.28 59.37
Os07t0283125-00 Rice plasma membrane 57.93 57.85
Os07t0130800-01 Rice plasma membrane 59.58 56.86
Os07t0131500-00 Rice plasma membrane 54.04 56.76
Os04t0531400-01 Rice plasma membrane 53.89 56.6
Os03t0772600-01 Rice plasma membrane 39.67 56.38
Zm00001d016009_P001 Maize plasma membrane 58.83 55.9
Os07t0130200-01 Rice plasma membrane 57.04 55.38
Os07t0130400-01 Rice plasma membrane 56.74 54.61
CDX91325 Canola cytosol, mitochondrion 21.26 53.79
Os02t0640500-01 Rice plasma membrane 53.74 53.26
Os07t0575600-02 Rice plasma membrane 55.54 53.23
Os10t0442000-01 Rice plasma membrane 55.99 52.9
TraesCS6B01G385500.1 Wheat plasma membrane 53.29 52.9
PGSC0003DMT400022983 Potato plasma membrane 52.4 52.63
KRH49145 Soybean plasma membrane 51.8 51.87
VIT_08s0007g00810.t01 Wine grape plasma membrane 52.4 51.47
KRH00016 Soybean plasma membrane 51.35 51.42
Os10t0441900-01 Rice plasma membrane 52.99 51.23
Os04t0531500-01 Rice plasma membrane 56.44 51.22
Solyc09g011990.1.1 Tomato plasma membrane 50.6 50.6
AT2G37710.1 Thale cress plasma membrane 50.9 50.37
PGSC0003DMT400052365 Potato plasma membrane 49.85 50.0
Bra005168.1-P Field mustard plasma membrane 50.3 49.93
CDX91384 Canola plasma membrane 50.15 49.78
PGSC0003DMT400022743 Potato plasma membrane 49.4 49.4
Solyc09g012000.1.1 Tomato plasma membrane 49.4 49.33
CDY21254 Canola plasma membrane 47.75 49.0
AT3G53810.1 Thale cress plasma membrane 49.55 48.89
Os09t0268100-00 Rice plasma membrane 35.33 48.76
AT4G02420.1 Thale cress plasma membrane 48.8 48.73
CDY65835 Canola plasma membrane 48.05 48.71
Os02t0298200-01 Rice plasma membrane 42.66 48.22
Bra035326.1-P Field mustard plasma membrane 48.35 48.14
Bra018553.1-P Field mustard plasma membrane 47.75 47.83
AT4G02410.1 Thale cress plasma membrane 48.2 47.77
Os02t0299000-00 Rice mitochondrion 41.92 47.38
CDX90939 Canola plasma membrane 46.86 47.35
Os07t0129800-00 Rice plasma membrane, vacuole 59.73 47.11
CDY55369 Canola plasma membrane 47.01 46.87
CDY02414 Canola plasma membrane 41.32 46.78
Bra000881.1-P Field mustard plasma membrane 47.16 46.67
Bra000880.1-P Field mustard plasma membrane 46.41 45.66
Os07t0575750-00 Rice plasma membrane 45.06 43.5
Os03t0823000-01 Rice plasma membrane 45.06 42.94
Os12t0574700-00 Rice plasma membrane 41.77 40.67
Solyc09g011060.2.1 Tomato plasma membrane 50.3 40.38
Os10t0533800-00 Rice plasma membrane 41.47 39.68
Os07t0131375-00 Rice plasma membrane 34.43 38.21
Zm00001d024637_P001 Maize plasma membrane 59.88 29.7
GSMUA_Achr9P09920_001 Banana plasma membrane 40.27 28.38
GSMUA_Achr9P10000_001 Banana cytosol 40.57 14.14
Os07t0575700-01 Rice plasma membrane 8.38 8.35
Os07t0129900-00 Rice plasma membrane 0.15 0.15
Protein Annotations
Gene3D:1.10.510.10EntrezGene:107276096MapMan:18.4.1.19Gene3D:2.60.120.200Gene3D:3.30.200.20ProteinID:BAD26261.1
ProteinID:BAT07150.1InterPro:ConA-like_dom_sfProteinID:EAZ43984.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0030246InterPro:IPR000719InterPro:Kinase-like_dom_sf
InterPro:Lectin_legB_Mn/Ca_BSInterPro:Legume_lectin_domEnsemblPlantsGene:Os09g0268000EnsemblPlants:Os09t0268000-00PFAM:PF00069PFAM:PF00139
ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00307PFscan:PS50011PANTHER:PTHR27007PANTHER:PTHR27007:SF134
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q6H4T8SMART:SM00220SUPFAM:SSF49899SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00003B4672RefSeq:XP_015610894.1SEG:seg
Description
Similar to lectin-like receptor kinase 7. (Os09t0268000-00)
Coordinates
chr9:-:5120497..5122573
Molecular Weight (calculated)
74918.6 Da
IEP (calculated)
8.328
GRAVY (calculated)
-0.083
Length
668 amino acids
Sequence
(BLAST)
001: MEHPPFFLLL VSLGFNLIAL CAGQNQFIYH GFTGKNLTID GTTKITPEGL LELTSDKNDL NGHAFFPTPM HFRSSPNSTV QSFSVNFMFA IQSFYSDRSY
101: DGMAFLIAPS NNLSTAWPDG YLGLFNISNR GNSSNRILAV ELDTFQNNEF GDISNSHVGI DINDVRSVNS SFAGFYDDKN GIFTNLTLYN GRAMQVWMEY
201: SEEATQITVT MAPIDTPKPK RPLLYATYDL STVLTDPVYI GFSAATGVIS TRHIVLGWSF GMGVPAPDID ITKLPKLPRV GTKPRSNVLE IVLPIASAMF
301: IIIVGTMVIL IVRRKLLYAE LREDWEIDFG PQRFSYKDLF HATQGFKNKN MIGVGGFGKV YKGVLATSKL EIAVKKISHE SRQGMKEFIT EIVSIGRLRH
401: RNLVPLLGYC RRKSELLLVY NYMPKGSLDK YLHDVDNRAI LNWAQRFQII KDVACGLFYL HERWEKVVIH RDIKASNILL DAEMNGRLGD FGLARLYDHG
501: TDLQTTHVVR TMGYLAPEMV QTGKASPLTD VFAFGAFLLE TTCGQRPVKQ NSQGNQLMLV DWVLKHWHDG SLTEAVDMRL QGDYNIEEAC LVLKLALVCL
601: HPFPASRPNM RQVMQYLDKD LPQPELAPTR LGFSKLPLMQ SKGFNPSAMS YPEFRTSIGT FSGLSGGR
Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.