Factsheet for Os02t0298200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G02410.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G02410.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G02410.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G02410.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G02410.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G02410.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G02410.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G02410.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G02410.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G02410.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G02410.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G02410.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G02410.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G02410.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G02410.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G02410.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G02410.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G02410.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G02410.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G02410.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G02410.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G02410.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G02410.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G02410.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0299000-00	Rice	mitochondrion	94.25	94.25
CDX91325	Canola	cytosol, mitochondrion	24.53	54.92
OQU84848	Sorghum	plasma membrane	57.36	47.95
Os04t0531400-01	Rice	plasma membrane	49.92	46.38
Os07t0283125-00	Rice	plasma membrane	49.41	43.65
Os07t0130200-01	Rice	plasma membrane	49.75	42.73
Os09t0268000-00	Rice	plasma membrane	48.22	42.66
Os07t0130800-01	Rice	plasma membrane	50.42	42.57
Os07t0130100-01	Rice	plasma membrane	48.73	42.29
Os07t0575600-02	Rice	plasma membrane	49.07	41.61
Os07t0283050-00	Rice	plasma membrane	47.04	41.55
Os07t0131500-00	Rice	plasma membrane	44.67	41.51
Os02t0640500-01	Rice	plasma membrane	47.21	41.39
Os07t0130400-01	Rice	plasma membrane	48.56	41.35
Os10t0442000-01	Rice	plasma membrane	48.22	40.31
KRH49145	Soybean	plasma membrane	45.01	39.88
Os03t0772600-01	Rice	plasma membrane	31.47	39.57
Os04t0531500-01	Rice	plasma membrane	49.24	39.54
PGSC0003DMT400022983	Potato	plasma membrane	44.33	39.4
Os10t0441900-01	Rice	plasma membrane	46.02	39.36
KRH00016	Soybean	plasma membrane	44.33	39.28
VIT_08s0007g00810.t01	Wine grape	plasma membrane	44.84	38.97
CDY65835	Canola	plasma membrane	43.15	38.7
PGSC0003DMT400052365	Potato	plasma membrane	43.32	38.44
Bra005168.1-P	Field mustard	plasma membrane	43.49	38.19
AT3G53810.1	Thale cress	plasma membrane	43.49	37.96
AT4G02410.1	Thale cress	plasma membrane	43.15	37.83
CDY55369	Canola	plasma membrane	42.81	37.76
CDX91384	Canola	plasma membrane	42.98	37.74
AT2G37710.1	Thale cress	plasma membrane	42.98	37.63
CDX90939	Canola	plasma membrane	41.96	37.52
Bra018553.1-P	Field mustard	plasma membrane	42.3	37.48
CDY21254	Canola	plasma membrane	41.29	37.48
AT4G02420.1	Thale cress	plasma membrane	42.13	37.22
Bra035326.1-P	Field mustard	plasma membrane	42.13	37.11
Bra000881.1-P	Field mustard	plasma membrane	42.3	37.04
Solyc09g011990.1.1	Tomato	plasma membrane	41.29	36.53
CDY02414	Canola	plasma membrane	36.04	36.1
Solyc09g012000.1.1	Tomato	plasma membrane	40.78	36.02
PGSC0003DMT400022743	Potato	plasma membrane	40.44	35.78
Bra000880.1-P	Field mustard	plasma membrane	40.61	35.35
Os03t0823000-01	Rice	plasma membrane	40.61	34.24
Os07t0131375-00	Rice	plasma membrane	34.86	34.22
Os07t0129800-00	Rice	plasma membrane, vacuole	48.39	33.77
Os12t0574700-00	Rice	plasma membrane	37.73	32.51
Os07t0575750-00	Rice	plasma membrane	37.23	31.79
Os10t0533800-00	Rice	plasma membrane	37.39	31.66
Os09t0268100-00	Rice	plasma membrane	25.38	30.99
Solyc09g011060.2.1	Tomato	plasma membrane	40.44	28.73
GSMUA_Achr9P09920_001	Banana	plasma membrane	35.36	22.05
GSMUA_Achr9P10000_001	Banana	cytosol	32.66	10.07
Os07t0575700-01	Rice	plasma membrane	9.64	8.49
Os07t0129900-00	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	EMBL:AK108666	ProteinID:BAD21694.1
ProteinID:BAD23353.1	ProteinID:BAF08526.1	ProteinID:BAS78233.1	InterPro:ConA-like_dom_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	EnsemblPlantsGene:Os02g0298200	EnsemblPlants:Os02t0298200-01	PFAM:PF00069	PFAM:PF00139
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF129	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q6K4S0	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0000377C95	SEG:seg	:	:	:

Description

Similar to Resistance protein candidate (Fragment). (Os02t0298200-01)

Coordinates

chr2:+:11427608..11429897

Molecular Weight (calculated)

65294.3 Da

IEP (calculated)

10.209

GRAVY (calculated)

-0.152

Length

591 amino acids

Sequence
(BLAST)

001: MASRRLKATH SIRRRCASRS CRHQKAGRRR QQCGLSRRPL CSASSLPPLV SAAMASPSSS PQPRTSPPGS PAHTWDSSTD QATATTEITS SRLSLIPSRA
101: PNSPTSTTTT SASTSIALCL QMPLMPATMM TTPIDVRLAP VGIKKPMKPL VSTRSNLSTV ITDEAYVGFS ASIGTMTSQH YVLGWSFGVG TQAPAIDMDK
201: LPKLPGRRSK KSYPPKTMVI ALPIVSVVLV IVVAAGVFLL IKRKFQRYVE LREDWELEFG AHRLSYKDLL QATERFKNKN LLGIGGFGRV YKGVLPTSSS
301: EVAVKRVSHD SRQGIKEFVA EVASIGRLRH RNLVQLLGYC RLKEELLLVY DYMPNGSLDK YLYSHDDKPT LNWAQRFQII KGIASGLLYL HEEWEQIVIH
401: RDIKPSNVLL DNDMNGRLGD FGLARLYNRD TELQTTVVAG TFGYMAPELA LTGKASPLTD VFAFGAFLLE VTSGRRPVEQ DIEGHRLLLT DWVFENCSKE
501: QILAVIDPRL NGNINISEAS LVLKLGLLCS HPMSNVRPTM RQVVQYLNGD MPLPEMSPMR FTFSLSALMQ NQGFDSSLKS LGTISNLSIG R

Best Arabidopsis Sequence Match ( AT1G70130.1 )
(BLAST)

001: MSLLLKMLLF SLFFFYMASI SQCSDPTGGQ FSFNGYLYTD GVADLNPDGL FKLITSKTQG GAGQVLYQFP LQFKNSPNGT VSSFSTTFVF AIVAVRKTIA
101: GCGLSFNISP TKGLNSVPNI DHSNHSVSVG FHTAKSDKPD GEDVNLVGIN IDSSKMDRNC SAGYYKDDGR LVNLDIASGK PIQVWIEYNN STKQLDVTMH
201: SIKISKPKIP LLSMRKDLSP YLHEYMYIGF TSVGSPTSSH YILGWSFNNK GAVSDINLSR LPKVPDEDQE RSLSSKILAI SLSISGVTLV IVLILGVMLF
301: LKRKKFLEVI EDWEVQFGPH KFTYKDLFIA TKGFKNSEVL GKGGFGKVFK GILPLSSIPI AVKKISHDSR QGMREFLAEI ATIGRLRHPD LVRLLGYCRR
401: KGELYLVYDF MPKGSLDKFL YNQPNQILDW SQRFNIIKDV ASGLCYLHQQ WVQVIIHRDI KPANILLDEN MNAKLGDFGL AKLCDHGIDS QTSNVAGTFG
501: YISPELSRTG KSSTSSDVFA FGVFMLEITC GRRPIGPRGS PSEMVLTDWV LDCWDSGDIL QVVDEKLGHR YLAEQVTLVL KLGLLCSHPV AATRPSMSSV
601: IQFLDGVATL PHNLLDLVNS RIINEGFDTL GVTTESMEAS SNVSLVMTES FLSSGR

Arabidopsis Description

LECRK52Putative L-type lectin-domain containing receptor kinase V.2 [Source:UniProtKB/Swiss-Prot;Acc:O04533]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.