Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 4
- cytosol 4
- plasma membrane 4
- extracellular 3
- endoplasmic reticulum 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
18022940
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37587 | Sorghum | cytosol | 92.21 | 92.21 |
| Zm00001d033980_P001 | Maize | cytosol | 76.62 | 75.16 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 67.53 | 69.8 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 67.53 | 69.8 |
| KRG92449 | Soybean | cytosol | 66.88 | 68.67 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 66.23 | 68.46 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 66.23 | 68.46 |
| Os01t0267900-01 | Rice | cytosol | 66.23 | 68.46 |
| Os07t0687200-02 | Rice | cytosol | 66.23 | 68.46 |
| KRH34350 | Soybean | cytosol | 66.23 | 68.0 |
| PGSC0003DMT400042062 | Potato | cytosol | 65.58 | 67.33 |
| Solyc06g053930.2.1 | Tomato | cytosol | 64.94 | 67.11 |
| KRH69070 | Soybean | cytosol | 64.94 | 66.67 |
| KRH31638 | Soybean | cytosol | 64.94 | 66.67 |
| TraesCS5A01G382800.2 | Wheat | plastid | 79.87 | 65.78 |
| Bra023786.1-P | Field mustard | cytosol | 64.94 | 64.1 |
| CDY34215 | Canola | cytosol | 64.94 | 64.1 |
| Bra033898.1-P | Field mustard | cytosol | 64.29 | 63.87 |
| CDY10686 | Canola | cytosol | 64.29 | 63.87 |
| Bra001892.1-P | Field mustard | cytosol | 63.64 | 63.64 |
| CDX92965 | Canola | cytosol | 63.64 | 63.64 |
| AT4G14640.1 | Thale cress | cytosol | 62.34 | 63.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.39 | 63.27 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 62.34 | 62.75 |
| KRH68729 | Soybean | cytosol | 59.74 | 61.74 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 59.09 | 61.49 |
| KRG96966 | Soybean | cytosol | 58.44 | 60.4 |
| CDY06478 | Canola | cytosol | 59.09 | 60.26 |
| KRH67274 | Soybean | cytosol | 57.79 | 60.14 |
| PGSC0003DMT400034833 | Potato | cytosol | 59.74 | 60.13 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 57.79 | 59.73 |
| KRG95596 | Soybean | cytosol | 57.14 | 59.46 |
| CDY10325 | Canola | cytosol | 42.86 | 58.41 |
| AT3G22930.1 | Thale cress | cytosol | 65.58 | 58.38 |
| Bra039723.1-P | Field mustard | cytosol | 57.79 | 58.17 |
| Os12t0603800-00 | Rice | cytosol | 62.34 | 57.83 |
| CDX94883 | Canola | cytosol | 41.56 | 57.66 |
| Solyc03g005240.1.1 | Tomato | cytosol | 57.14 | 57.52 |
| KRH34082 | Soybean | cytosol | 55.19 | 57.05 |
| Solyc01g105630.2.1 | Tomato | cytosol | 53.25 | 55.78 |
| PGSC0003DMT400083727 | Potato | cytosol | 53.25 | 55.78 |
| KRG92667 | Soybean | cytosol | 53.9 | 55.7 |
| CDY40824 | Canola | cytosol | 64.94 | 55.56 |
| Os01t0810300-01 | Rice | plasma membrane | 62.99 | 51.87 |
| KRH71363 | Soybean | cytosol | 49.35 | 51.01 |
| KRG94637 | Soybean | cytosol | 37.66 | 50.88 |
| Os11t0586200-00 | Rice | cytosol | 47.4 | 48.34 |
| KRH32074 | Soybean | cytosol | 46.1 | 47.65 |
| Os08t0117400-01 | Rice | plasma membrane | 37.01 | 38.51 |
| Os05t0491000-01 | Rice | cytosol | 38.31 | 38.06 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 39.61 | 35.26 |
| Os10t0389000-01 | Rice | plasma membrane | 40.26 | 32.46 |
| Os07t0618800-01 | Rice | plasma membrane | 37.66 | 27.75 |
| Os01t0505600-01 | Rice | cytosol | 35.71 | 26.07 |
| Os01t0604500-01 | Rice | cytosol | 40.26 | 24.9 |
| KXG37588 | Sorghum | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:4334072 | ProteinID:AAP13012.1 | ProteinID:ABF98816.1 | EMBL:AK067697 |
| ProteinID:BAF13147.1 | ProteinID:BAS86325.1 | ProteinID:EEE59909.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0046872 | InterPro:IPR002048 | EnsemblPlantsGene:Os03g0743500 |
| EnsemblPlants:Os03t0743500-02 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF198 |
| UniProt:Q84MN0 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000018F122 | RefSeq:XP_015630917.1 | : |
Description
CALMODULIN-LIKE PROTEIN 4Calcium-binding EF-hand domain containing protein. (Os03t0743500-01);Similar to Calmodulin 1 (Fragment). (Os03t0743500-02)
Coordinates
chr3:+:30517571..30519662
Molecular Weight (calculated)
17334.3 Da
IEP (calculated)
3.793
GRAVY (calculated)
-0.518
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLTSEQMV AFQEAFLLFD KNGDGCITLE ELAAVTRSLG LEPTDQELND MMREVDTDGN GIIDFQEFLS LIARKMKDGD GDEELKEAFE VLDKDQNGFI
101: SPTELRTVMT NLGEKMTDEE VEQMIREADT DGDGQVNYDE FVIMMKNAER KISG
101: SPTELRTVMT NLGEKMTDEE VEQMIREADT DGDGQVNYDE FVIMMKNAER KISG
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.