Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G46130.1 | Thale cress | nucleus | 30.32 | 70.64 |
| EES01425 | Sorghum | nucleus | 65.75 | 67.89 |
| Zm00001d012789_P001 | Maize | nucleus | 60.24 | 67.4 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 56.3 | 64.41 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 55.91 | 63.96 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 55.12 | 60.61 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 39.37 | 55.56 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 42.91 | 54.23 |
| KRH00862 | Soybean | cytosol | 40.16 | 53.12 |
| KRH40372 | Soybean | cytosol | 40.16 | 53.12 |
| KRH06569 | Soybean | nucleus | 39.76 | 51.79 |
| CDY44466 | Canola | nucleus | 33.86 | 48.86 |
| Bra025490.1-P | Field mustard | nucleus | 33.07 | 48.28 |
| AT5G41570.1 | Thale cress | nucleus | 33.86 | 48.04 |
| CDY39732 | Canola | nucleus | 33.07 | 47.73 |
| Bra027768.1-P | Field mustard | nucleus | 33.86 | 45.99 |
| CDY25554 | Canola | nucleus | 33.86 | 45.74 |
| CDY38208 | Canola | nucleus | 33.46 | 45.7 |
| CDY34393 | Canola | nucleus | 33.86 | 45.26 |
| CDY55479 | Canola | nucleus | 33.07 | 45.16 |
| Bra027675.1-P | Field mustard | nucleus | 33.46 | 44.97 |
| PGSC0003DMT400032090 | Potato | nucleus | 39.76 | 44.3 |
| AT1G64000.1 | Thale cress | nucleus | 33.86 | 44.1 |
| Solyc08g081630.1.1 | Tomato | nucleus | 39.76 | 43.72 |
| Os11t0490900-01 | Rice | nucleus | 32.28 | 33.88 |
| Os04t0545000-01 | Rice | cytosol | 27.17 | 27.6 |
| Os05t0537100-00 | Rice | cytosol, plastid | 22.83 | 26.24 |
| Os05t0183100-01 | Rice | nucleus | 21.65 | 25.94 |
| Os01t0186000-01 | Rice | cytosol, nucleus | 18.9 | 24.87 |
| Os03t0758000-01 | Rice | nucleus, plastid | 22.44 | 24.68 |
| Os02t0652100-01 | Rice | extracellular, mitochondrion, nucleus | 15.35 | 23.93 |
| Os01t0714800-01 | Rice | plastid | 22.05 | 22.86 |
| Os01t0584900-01 | Rice | nucleus | 22.05 | 22.76 |
| Os01t0182700-01 | Rice | nucleus | 23.62 | 21.43 |
| Os07t0111400-00 | Rice | nucleus | 24.02 | 21.03 |
| Os05t0583000-01 | Rice | nucleus | 24.8 | 18.69 |
| Os01t0626400-01 | Rice | nucleus | 24.41 | 16.36 |
| Os05t0565900-00 | Rice | nucleus | 24.41 | 14.8 |
| Os01t0665500-00 | Rice | plastid | 1.57 | 3.51 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4324161 | EMBL:AK108909 | EMBL:AY341845 | EMBL:AY870607 |
| ProteinID:BAB68074.1 | ProteinID:BAB89937.1 | ProteinID:BAF06077.1 | ProteinID:BAS74209.1 | ProteinID:DAA05088.1 | ProteinID:EEE55344.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | EnsemblPlantsGene:Os01g0734000 | EnsemblPlants:Os01t0734000-01 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF7 | UniProt:Q942D2 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000A8EAB | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | RefSeq:XP_015621376.1 | SEG:seg | : | : | : |
Description
WRKY GENE 23Similar to WRKY DNA binding protein. (Os01t0734000-01)
Coordinates
chr1:+:30604326..30608077
Molecular Weight (calculated)
27797.7 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.656
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MENLQLQGDD HDDEALPHFP YFAVPSPPPL AVAPAASATT SDGHQHGPLE VLEQPPCSNN LHPDGLVDGP QLAATTAVPM MLPAMTSLDW QSLLQTCLQV
101: PPPVLEQQQP AAAAQADQYS GENDHGDLQA AESSGAGNKE KQVMAKGGAG RPSGTKKKAS RPRFAFQTRS DNDILDDGYR WRKYGQKAVK NSKHPRSYYR
201: CTHHTCNVKK QVQRLAKDTS IVVTTYEGVH NHPCEKLMEA LTPILKQLQF LSQF
101: PPPVLEQQQP AAAAQADQYS GENDHGDLQA AESSGAGNKE KQVMAKGGAG RPSGTKKKAS RPRFAFQTRS DNDILDDGYR WRKYGQKAVK NSKHPRSYYR
201: CTHHTCNVKK QVQRLAKDTS IVVTTYEGVH NHPCEKLMEA LTPILKQLQF LSQF
001: MDREDINPML SRLDVENNNT FSSFVDKTLM MMPPSTFSGE VEPSSSSSWY PESFHVHAPP LPPENDQIGE KGKELKEKRS RKVPRIAFHT RSDDDVLDDG
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
101: YRWRKYGQKS VKHNAHPRSY YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
Arabidopsis Description
WRKY24Probable WRKY transcription factor 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.