Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027768.1-P | Field mustard | nucleus | 97.31 | 96.79 |
| CDY38208 | Canola | nucleus | 96.24 | 96.24 |
| CDY25554 | Canola | nucleus | 87.63 | 86.7 |
| CDY34393 | Canola | nucleus | 86.02 | 84.21 |
| AT1G64000.1 | Thale cress | nucleus | 84.41 | 80.51 |
| CDY44466 | Canola | nucleus | 63.44 | 67.05 |
| CDY39732 | Canola | nucleus | 62.9 | 66.48 |
| TraesCS1A01G348600.1 | Wheat | plastid | 40.86 | 56.3 |
| TraesCS1D01G351600.1 | Wheat | plastid | 40.86 | 56.3 |
| CDY72079 | Canola | nucleus | 27.96 | 46.85 |
| GSMUA_Achr7P24780_001 | Banana | nucleus | 44.09 | 45.56 |
| CDX78504 | Canola | nucleus | 35.48 | 44.9 |
| CDX70492 | Canola | nucleus | 35.48 | 44.9 |
| CDX97223 | Canola | nucleus | 35.48 | 44.9 |
| CDX69672 | Canola | nucleus | 34.95 | 44.22 |
| KRH00862 | Soybean | cytosol | 44.09 | 42.71 |
| KRH40372 | Soybean | cytosol | 42.47 | 41.15 |
| CDX77096 | Canola | nucleus | 31.72 | 40.97 |
| VIT_15s0046g02150.t01 | Wine grape | nucleus, plastid | 43.55 | 40.3 |
| Zm00001d012789_P001 | Maize | nucleus | 46.24 | 37.89 |
| Zm00001d038761_P002 | Maize | nucleus | 43.55 | 37.16 |
| PGSC0003DMT400032090 | Potato | nucleus | 44.62 | 36.4 |
| EES01425 | Sorghum | nucleus | 47.85 | 36.18 |
| Zm00001d010805_P001 | Maize | nucleus | 44.09 | 35.81 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 42.47 | 35.59 |
| Solyc08g081630.1.1 | Tomato | nucleus | 44.09 | 35.5 |
| TraesCS3A01G280400.1 | Wheat | nucleus | 41.4 | 34.68 |
| TraesCS1B01G363200.1 | Wheat | nucleus | 42.47 | 34.5 |
| GSMUA_Achr6P22920_001 | Banana | mitochondrion | 41.94 | 34.36 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 41.94 | 33.77 |
| EES19853 | Sorghum | nucleus, plastid | 43.55 | 33.61 |
| Os01t0734000-01 | Rice | nucleus | 45.16 | 33.07 |
| CDY05537 | Canola | nucleus | 26.34 | 29.17 |
| CDY24990 | Canola | nucleus | 26.34 | 28.99 |
| CDX83415 | Canola | nucleus, plastid | 28.49 | 28.19 |
| CDX95615 | Canola | nucleus, plastid | 28.49 | 27.89 |
| CDX88219 | Canola | nucleus | 25.27 | 26.7 |
| CDX87064 | Canola | nucleus | 24.19 | 26.32 |
| HORVU1Hr1G081570.1 | Barley | plastid | 43.01 | 26.14 |
| CDY18694 | Canola | nucleus | 24.19 | 26.01 |
| CDY48151 | Canola | nucleus | 23.66 | 25.73 |
| CDY52627 | Canola | nucleus | 24.19 | 25.57 |
| CDY71963 | Canola | nucleus | 28.49 | 24.77 |
| CDY48258 | Canola | nucleus | 28.49 | 24.65 |
| CDY30483 | Canola | nucleus | 28.49 | 24.09 |
| CDY23453 | Canola | nucleus | 27.96 | 23.85 |
| CDX81259 | Canola | nucleus | 25.27 | 23.62 |
| CDY31301 | Canola | nucleus | 24.19 | 22.84 |
| CDY14512 | Canola | nucleus | 25.27 | 22.82 |
| CDY08849 | Canola | nucleus | 25.27 | 22.82 |
| CDX72701 | Canola | nucleus | 29.57 | 19.5 |
| CDY26310 | Canola | nucleus | 28.49 | 19.41 |
| CDY53184 | Canola | nucleus | 30.11 | 19.11 |
| CDX99859 | Canola | nucleus | 27.96 | 19.05 |
| CDY43194 | Canola | nucleus | 27.96 | 18.77 |
| CDY12144 | Canola | nucleus | 29.57 | 18.64 |
| CDY41978 | Canola | nucleus | 29.57 | 18.46 |
| CDY08894 | Canola | nucleus | 29.03 | 18.37 |
| CDX98155 | Canola | nucleus | 27.96 | 18.31 |
| CDY04276 | Canola | nucleus | 27.96 | 18.12 |
| CDX76541 | Canola | nucleus | 28.49 | 18.03 |
| CDY07352 | Canola | nucleus | 27.96 | 17.99 |
| CDY37794 | Canola | nucleus | 30.11 | 17.89 |
| CDX95947 | Canola | nucleus | 27.96 | 17.69 |
| CDY40910 | Canola | nucleus | 27.96 | 17.69 |
| CDY54139 | Canola | nucleus | 27.96 | 17.45 |
| CDX80094 | Canola | nucleus | 29.57 | 17.41 |
| CDY72613 | Canola | nucleus | 29.57 | 17.03 |
| CDX78832 | Canola | nucleus | 27.96 | 16.88 |
| CDY11416 | Canola | nucleus | 26.88 | 16.78 |
| CDY51420 | Canola | nucleus | 29.03 | 16.67 |
| CDX99495 | Canola | nucleus | 27.96 | 16.67 |
| CDY50313 | Canola | nucleus | 27.42 | 16.5 |
| CDX76630 | Canola | nucleus | 26.34 | 16.5 |
| CDY01523 | Canola | nucleus | 27.42 | 16.35 |
| CDX90417 | Canola | nucleus | 27.42 | 16.29 |
| CDY09083 | Canola | nucleus | 27.42 | 16.29 |
| CDX87722 | Canola | nucleus | 27.42 | 16.29 |
| CDY27500 | Canola | nucleus | 29.03 | 16.22 |
| CDY33471 | Canola | nucleus | 27.96 | 16.1 |
| CDX77655 | Canola | nucleus | 27.96 | 16.1 |
| CDY43969 | Canola | nucleus | 26.88 | 15.77 |
| CDY46824 | Canola | nucleus | 23.66 | 15.17 |
| CDY03224 | Canola | nucleus | 25.81 | 14.95 |
| CDY35159 | Canola | nucleus | 25.81 | 14.95 |
| CDY05620 | Canola | nucleus | 30.11 | 14.32 |
| CDX85413 | Canola | nucleus | 30.65 | 14.29 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078J149 | UniProt:A0A078J149 | EnsemblPlants:CDY55479 | ProteinID:CDY55479 |
| ProteinID:CDY55479.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00016941001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF7 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF2397 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng28950DBnaCnng28950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J149]
Coordinates
chrLK033408:+:591..1848
Molecular Weight (calculated)
20913.7 Da
IEP (calculated)
6.714
GRAVY (calculated)
-0.741
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGIDNTHSM LTLEEGENNP FSSFDDKQLM MMVPSLMFSG DMGTSSCSPA SFHMSSQPEN FQGGGGGEPM EMGGLNDHNN KGKGKISSAL QRIAFHTRSD
101: DDVLDDGYRW KKYGQKSVKN NAHPRSYYRC TYHTCNVKKQ VQRLAEDPKV VVTTYEGVHN HPCEKLMETL SPLLRQLQFL TRVSDL
101: DDVLDDGYRW KKYGQKSVKN NAHPRSYYRC TYHTCNVKKQ VQRLAEDPKV VVTTYEGVHN HPCEKLMETL SPLLRQLQFL TRVSDL
001: MEGVDNTNPM LTLEEGENNN PFSSLDDKTL MMMAPSLIFS GDVGPSSSSC TPAGYHLSAQ LENFRGGGGE MGGLVSNNSN NSDHNKNCNK GKGKRTLAMQ
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
101: RIAFHTRSDD DVLDDGYRWR KYGQKSVKNN AHPRSYYRCT YHTCNVKKQV QRLAKDPNVV VTTYEGVHNH PCEKLMETLS PLLRQLQFLS RVSDL
Arabidopsis Description
WRKY56At1g64000 [Source:UniProtKB/TrEMBL;Acc:Q29PS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.