Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35159 | Canola | nucleus | 98.44 | 98.44 |
| Bra017561.1-P | Field mustard | nucleus | 98.13 | 98.13 |
| CDX77655 | Canola | nucleus | 84.42 | 83.9 |
| CDY33471 | Canola | nucleus | 83.8 | 83.28 |
| CDY43969 | Canola | nucleus | 80.37 | 81.39 |
| AT5G46350.1 | Thale cress | nucleus | 79.75 | 78.53 |
| CDX76541 | Canola | nucleus | 56.39 | 61.56 |
| CDY08894 | Canola | nucleus | 56.07 | 61.22 |
| CDY09083 | Canola | nucleus | 57.63 | 59.11 |
| CDX90417 | Canola | nucleus | 57.63 | 59.11 |
| CDY01523 | Canola | nucleus | 57.01 | 58.65 |
| CDX78832 | Canola | nucleus | 55.14 | 57.47 |
| CDX99495 | Canola | nucleus | 55.14 | 56.73 |
| CDY72079 | Canola | nucleus | 18.38 | 53.15 |
| CDX87722 | Canola | nucleus | 49.22 | 50.48 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 40.81 | 41.07 |
| CDY43194 | Canola | nucleus | 34.27 | 39.71 |
| CDX77096 | Canola | nucleus | 17.45 | 38.89 |
| CDX98155 | Canola | nucleus | 33.96 | 38.38 |
| CDX99859 | Canola | nucleus | 32.4 | 38.1 |
| CDY26310 | Canola | nucleus | 32.09 | 37.73 |
| KRH58435 | Soybean | nucleus | 41.12 | 36.87 |
| KRH42308 | Soybean | nucleus | 40.81 | 35.31 |
| CDX70492 | Canola | nucleus | 15.89 | 34.69 |
| CDX78504 | Canola | nucleus | 15.89 | 34.69 |
| CDX97223 | Canola | nucleus | 15.58 | 34.01 |
| CDX69672 | Canola | nucleus | 15.58 | 34.01 |
| CDX83415 | Canola | nucleus, plastid | 19.63 | 33.51 |
| CDY48151 | Canola | nucleus | 17.76 | 33.33 |
| CDX95615 | Canola | nucleus, plastid | 19.63 | 33.16 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 30.84 | 33.0 |
| CDX87064 | Canola | nucleus | 17.13 | 32.16 |
| CDY05537 | Canola | nucleus | 16.82 | 32.14 |
| OQU78504 | Sorghum | nucleus | 26.17 | 32.06 |
| CDY24990 | Canola | nucleus | 16.82 | 31.95 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 28.97 | 31.53 |
| CDY37794 | Canola | nucleus | 29.28 | 30.03 |
| CDY30483 | Canola | nucleus | 20.56 | 30.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.79 | 29.86 |
| CDY23453 | Canola | nucleus | 20.25 | 29.82 |
| CDY52627 | Canola | nucleus | 16.2 | 29.55 |
| CDX88219 | Canola | nucleus | 16.2 | 29.55 |
| CDY71963 | Canola | nucleus | 19.63 | 29.44 |
| CDX80094 | Canola | nucleus | 28.97 | 29.43 |
| CDY48258 | Canola | nucleus | 19.63 | 29.3 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 26.79 | 29.05 |
| CDY51420 | Canola | nucleus | 29.28 | 29.01 |
| CDY44466 | Canola | nucleus | 15.89 | 28.98 |
| CDY39732 | Canola | nucleus | 15.58 | 28.41 |
| CDY27500 | Canola | nucleus | 28.97 | 27.93 |
| CDX95947 | Canola | nucleus | 25.55 | 27.89 |
| CDY40910 | Canola | nucleus | 25.55 | 27.89 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 24.92 | 27.78 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 24.61 | 27.62 |
| CDY54139 | Canola | nucleus | 25.55 | 27.52 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 17.76 | 27.4 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 24.3 | 27.18 |
| CDY04276 | Canola | nucleus | 24.3 | 27.18 |
| CDY07352 | Canola | nucleus | 24.3 | 26.99 |
| CDY11416 | Canola | nucleus | 24.92 | 26.85 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 25.55 | 26.71 |
| CDX76630 | Canola | nucleus | 24.61 | 26.6 |
| CDY38208 | Canola | nucleus | 15.26 | 26.34 |
| CDY34393 | Canola | nucleus | 15.58 | 26.32 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 25.23 | 26.21 |
| CDY25554 | Canola | nucleus | 15.26 | 26.06 |
| CDY18694 | Canola | nucleus | 14.02 | 26.01 |
| CDY72613 | Canola | nucleus | 26.17 | 26.01 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 25.23 | 25.96 |
| CDY55479 | Canola | nucleus | 14.95 | 25.81 |
| CDY50313 | Canola | nucleus | 24.61 | 25.57 |
| Os05t0583000-01 | Rice | nucleus | 26.79 | 25.52 |
| CDY05620 | Canola | nucleus | 30.22 | 24.81 |
| CDY41978 | Canola | nucleus | 22.74 | 24.5 |
| CDY53184 | Canola | nucleus | 22.12 | 24.23 |
| CDX72701 | Canola | nucleus | 21.18 | 24.11 |
| CDX81259 | Canola | nucleus | 14.64 | 23.62 |
| CDX85413 | Canola | nucleus | 29.28 | 23.56 |
| CDY12144 | Canola | nucleus | 21.5 | 23.39 |
| CDY08849 | Canola | nucleus | 14.33 | 22.33 |
| CDY14512 | Canola | nucleus | 14.33 | 22.33 |
| CDY31301 | Canola | nucleus | 12.77 | 20.81 |
| CDY46824 | Canola | nucleus | 13.08 | 14.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078ER94 | EnsemblPlants:CDY03224 | ProteinID:CDY03224 | ProteinID:CDY03224.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00115735001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PIRSF:PIRSF038130 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI0004EE2E46 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
BnaC09g19320D
Coordinates
chrLK031941:+:884660..888204
Molecular Weight (calculated)
36409.6 Da
IEP (calculated)
8.104
GRAVY (calculated)
-1.074
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNETKDLNN YHYTSSYNHY NNINSQNMSL PYVSGPCTYN ANMISSQIGS DLHSSSQGAF GFGFEPSPSS SEFFNPSIDQ ENGFYNAYNY NTSLKSHEVV
101: GGGGAIAENE TRVSASPSSG EAHHHHGEDS GKSLLKREAD DGGDKQRSQK VVKTKKNQEK KIREPRVSFM TKTEVDHLED GYRWRKYGQK AVKNSPYPRS
201: YYRCTTQKCN VKKRVERSYQ DPTVVITTYE SQHDHPIPTT RRTAMFSGPA ASDYKSSSLS PGSNFINTPR SFSHDDLFRV PYSSMNANPN YQQQQNHEFQ
301: HGSDYELLKE MFPSVFFKQE P
101: GGGGAIAENE TRVSASPSSG EAHHHHGEDS GKSLLKREAD DGGDKQRSQK VVKTKKNQEK KIREPRVSFM TKTEVDHLED GYRWRKYGQK AVKNSPYPRS
201: YYRCTTQKCN VKKRVERSYQ DPTVVITTYE SQHDHPIPTT RRTAMFSGPA ASDYKSSSLS PGSNFINTPR SFSHDDLFRV PYSSMNANPN YQQQQNHEFQ
301: HGSDYELLKE MFPSVFFKQE P
001: MSHEIKDLNN YHYTSSYNHY NINNQNMINL PYVSGPSAYN ANMISSSQVG FDLPSKNLSP QGAFELGFEL SPSSSDFFNP SLDQENGLYN AYNYNSSQKS
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP
101: HEVVGDGCAT IKSEVRVSAS PSSSEADHHP GEDSGKIRKK REVRDGGEDD QRSQKVVKTK KKEEKKKEPR VSFMTKTEVD HLEDGYRWRK YGQKAVKNSP
201: YPRSYYRCTT QKCNVKKRVE RSYQDPTVVI TTYESQHNHP IPTNRRTAMF SGTTASDYNP SSSPIFSDLI INTPRSFSND DLFRVPYASV NVNPSYHQQQ
301: HGFHQQESEF ELLKEMFPSV FFKQEP
Arabidopsis Description
WRKY8Probable WRKY transcription factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL26]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.