Factsheet for VIT_10s0003g02810.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58435	Soybean	nucleus	61.76	55.03
KRH42308	Soybean	nucleus	63.95	54.99
VIT_12s0028g00270.t01	Wine grape	nucleus	52.98	54.34
Bra040926.1-P	Field mustard	nucleus	43.26	46.94
CDX76541	Canola	nucleus	43.26	46.94
CDY01523	Canola	nucleus	45.77	46.79
VIT_04s0069g00980.t01	Wine grape	nucleus	14.73	46.53
Bra012614.1-P	Field mustard	nucleus	45.45	46.47
CDY09083	Canola	nucleus	45.45	46.33
CDX90417	Canola	nucleus	45.45	46.33
CDY08894	Canola	nucleus	42.32	45.92
AT4G18170.1	Thale cress	nucleus	45.77	45.91
CDX99495	Canola	nucleus	43.57	44.55
CDX78832	Canola	nucleus	42.95	44.48
Bra013289.1-P	Field mustard	nucleus	42.63	44.16
GSMUA_Achr9P06750_001	Banana	nucleus	39.19	42.37
CDY43969	Canola	nucleus	41.07	41.32
Bra022033.1-P	Field mustard	nucleus	41.07	41.32
Bra025021.1-P	Field mustard	nucleus	41.38	40.87
CDY03224	Canola	nucleus	41.07	40.81
GSMUA_Achr6P27090_001	Banana	nucleus	38.24	40.67
CDY33471	Canola	nucleus	41.07	40.56
CDY35159	Canola	nucleus	40.75	40.5
Bra017561.1-P	Field mustard	nucleus	40.75	40.5
VIT_17s0000g01280.t01	Wine grape	nucleus	19.12	40.4
CDX77655	Canola	nucleus	40.75	40.25
VIT_04s0008g01470.t01	Wine grape	nucleus	20.69	39.76
AT5G46350.1	Thale cress	nucleus	40.13	39.26
GSMUA_AchrUn_...	Banana	nucleus	35.11	38.89
VIT_05s0077g00730.t01	Wine grape	nucleus	37.62	38.84
VIT_07s0005g01710.t01	Wine grape	nucleus	35.11	37.09
OQU78504	Sorghum	nucleus	30.09	36.64
VIT_01s0010g03930.t01	Wine grape	nucleus, plastid	21.63	36.51
VIT_14s0068g01770.t01	Wine grape	nucleus	20.06	35.16
CDX87722	Canola	nucleus	33.54	34.19
VIT_04s0069g00970.t01	Wine grape	nucleus	16.61	33.97
VIT_07s0031g01710.t01	Wine grape	nucleus	19.12	33.89
TraesCS1D01G430000.1	Wheat	nucleus	31.35	33.78
VIT_01s0011g00720.t01	Wine grape	nucleus	32.29	33.77
TraesCS1A01G421800.1	Wheat	nucleus	30.09	33.57
TraesCS1B01G453200.1	Wheat	nucleus	30.09	33.45
TraesCS1A01G421900.1	Wheat	nucleus	21.63	33.17
TraesCS1D01G429800.1	Wheat	nucleus	29.78	32.99
TraesCS1D01G429900.1	Wheat	nucleus	30.72	31.92
VIT_07s0031g01840.t01	Wine grape	nucleus	22.57	31.86
VIT_15s0046g02150.t01	Wine grape	nucleus, plastid	20.06	31.84
Os05t0583000-01	Rice	nucleus	33.23	31.45
HORVU1Hr1G092130.1	Barley	nucleus	30.41	31.39
TraesCS1B01G453300.1	Wheat	nucleus	30.41	31.09

Protein Annotations

EntrezGene:100257231	wikigene:100257231	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:AM472647	ProteinID:CAN72742
ProteinID:CAN72742.1	ProteinID:CBI30827	ProteinID:CBI30827.3	UniProt:D7TK05	EMBL:FN595992	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EMBL:KT009011	EntrezGene:LOC100257231	wikigene:LOC100257231	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF56	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0001985929	ArrayExpress:VIT_10s0003g02810	EnsemblPlantsGene:VIT_10s0003g02810
EnsemblPlants:VIT_10s0003g02810.t01	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_002272089	RefSeq:XP_002272089.1	SEG:seg

Description

WRKY8 [Source:UniProtKB/TrEMBL;Acc:D7TK05]

Coordinates

chr10:+:4894494..4896041

Molecular Weight (calculated)

35002.7 Da

IEP (calculated)

7.300

GRAVY (calculated)

-0.782

Length

319 amino acids

Sequence
(BLAST)

001: MSDEPRDLYY HDPFHDDRHG IIGNTGFSFS AINDSKADSS MRAAPSPPNL QGFDPPYMSF TDCLNGSLDY NSLTTAFGLS PSSSEAFSPV EGNHKPVANL
101: GDLGASGEIA GTPNSSISSS STEAGAEEDS SKSKKDRQAK VSELDGGDGS KKVNKPKKKA EKRQREPRFA FMTKSEVDHL EDGYRWRKYG QKAVKNSPFP
201: RSYYRCTTQK CTVKKRVERS FQDPSTVITT YEGQHNHQIP VTLRGNAGGM LPPSVLTPGQ MGGPGFPQEL FFQMASPMNN LSAAGSFYPQ GLTPFQQLQF
301: HDYGLLQDVV PSMIHKQEP

Best Arabidopsis Sequence Match ( AT4G18170.1 )
(BLAST)

001: MSNETRDLYN YQYPSSFSLH EMMNLPTSNP SSYGNLPSQN GFNPSTYSFT DCLQSSPAAY ESLLQKTFGL SPSSSEVFNS SIDQEPNRDV TNDVINGGAC
101: NETETRVSPS NSSSSEADHP GEDSGKSRRK RELVGEEDQI SKKVGKTKKT EVKKQREPRV SFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ
201: KCNVKKRVER SFQDPTVVIT TYEGQHNHPI PTNLRGSSAA AAMFSADLMT PRSFAHDMFR TAAYTNGGSV AAALDYGYGQ SGYGSVNSNP SSHQVYHQGG
301: EYELLREIFP SIFFKQEP

Arabidopsis Description

WRKY28WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.