Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G429900.1 | Wheat | nucleus | 82.52 | 83.06 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 77.02 | 82.64 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 81.88 | 81.09 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 72.17 | 77.7 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 71.52 | 77.27 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 72.82 | 76.01 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 49.51 | 73.56 |
| Os05t0583000-01 | Rice | nucleus | 46.28 | 42.43 |
| OQU78504 | Sorghum | nucleus | 35.28 | 41.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.66 | 36.11 |
| CDX98155 | Canola | nucleus | 28.8 | 31.34 |
| VIT_12s0028g00270.t01 | Wine grape | nucleus | 31.39 | 31.19 |
| AT1G29860.1 | Thale cress | nucleus | 28.16 | 30.85 |
| Bra030178.1-P | Field mustard | nucleus | 27.51 | 30.69 |
| CDY43194 | Canola | nucleus | 27.51 | 30.69 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 19.42 | 30.61 |
| VIT_10s0003g02810.t01 | Wine grape | nucleus | 31.39 | 30.41 |
| Bra032340.1-P | Field mustard | nucleus | 26.54 | 30.04 |
| CDY26310 | Canola | nucleus | 26.54 | 30.04 |
| CDX99859 | Canola | nucleus | 26.21 | 29.67 |
| Bra040926.1-P | Field mustard | nucleus | 27.83 | 29.25 |
| CDX76541 | Canola | nucleus | 27.83 | 29.25 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 21.36 | 29.07 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 21.36 | 28.7 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 18.45 | 28.64 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 21.36 | 28.57 |
| CDY08894 | Canola | nucleus | 27.18 | 28.57 |
| Bra012614.1-P | Field mustard | nucleus | 28.8 | 28.53 |
| CDX99495 | Canola | nucleus | 28.8 | 28.53 |
| CDY09083 | Canola | nucleus | 28.8 | 28.43 |
| CDX90417 | Canola | nucleus | 28.8 | 28.43 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 26.21 | 28.42 |
| KRH73639 | Soybean | nucleus | 30.74 | 28.19 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 26.21 | 28.12 |
| KRH14487 | Soybean | nucleus | 30.42 | 28.06 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 33.01 | 28.02 |
| HORVU0Hr1G001430.1 | Barley | plastid | 19.74 | 27.98 |
| KRH58435 | Soybean | nucleus | 32.36 | 27.93 |
| Bra013289.1-P | Field mustard | nucleus | 27.83 | 27.92 |
| CDX78832 | Canola | nucleus | 27.83 | 27.92 |
| CDY01523 | Canola | nucleus | 28.16 | 27.88 |
| AT4G18170.1 | Thale cress | nucleus | 28.48 | 27.67 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 18.45 | 26.89 |
| KRH42308 | Soybean | nucleus | 32.04 | 26.68 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 25.57 | 26.16 |
| Bra022033.1-P | Field mustard | nucleus | 26.54 | 25.87 |
| CDY43969 | Canola | nucleus | 26.54 | 25.87 |
| CDY35159 | Canola | nucleus | 26.21 | 25.23 |
| CDY03224 | Canola | nucleus | 26.21 | 25.23 |
| CDX77655 | Canola | nucleus | 26.21 | 25.08 |
| Bra017561.1-P | Field mustard | nucleus | 25.89 | 24.92 |
| AT5G46350.1 | Thale cress | nucleus | 25.89 | 24.54 |
| CDY33471 | Canola | nucleus | 25.57 | 24.46 |
| Bra025021.1-P | Field mustard | nucleus | 25.57 | 24.46 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 20.71 | 24.24 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 18.77 | 23.58 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 19.42 | 21.51 |
| CDX87722 | Canola | nucleus | 21.36 | 21.09 |
| HORVU1Hr1G081570.1 | Barley | plastid | 20.71 | 20.91 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 17.8 | 20.68 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287GR86 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU1Hr1G092130 | EnsemblPlants:HORVU1Hr1G092130.1 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B47CD7D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:+:549783755..549787242
Molecular Weight (calculated)
32253.3 Da
IEP (calculated)
6.947
GRAVY (calculated)
-0.580
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSSMSGSAA GGQGPGVVGL FYGGHPPAAD GDDDVFFQSH SASGGGGDDG GVTPSAYSSI TDYLQGLLDP AELARQLDAP APPCFPTAAE VIGAEAAPFT
101: PNSSTSGEAA GCKRGSPAPE EGDEEGSAGH GSCRSDEKEQ KKKVKGEKKA RGSRVAFATK SEVDHLDDGY RWRKYGQKAV KNSSFPRSYY RCTAARCGVK
201: KLVERSQQDP STVVTTYEGR HGHPSPVAAH RGARMLMATG ADTAYSLAAL QHQQHGFFPA GADVYGRMCV PPTTAAAPAV PHRSSEYGGM VSYADLLPDA
301: VMGYQQGHR
101: PNSSTSGEAA GCKRGSPAPE EGDEEGSAGH GSCRSDEKEQ KKKVKGEKKA RGSRVAFATK SEVDHLDDGY RWRKYGQKAV KNSSFPRSYY RCTAARCGVK
201: KLVERSQQDP STVVTTYEGR HGHPSPVAAH RGARMLMATG ADTAYSLAAL QHQQHGFFPA GADVYGRMCV PPTTAAAPAV PHRSSEYGGM VSYADLLPDA
301: VMGYQQGHR
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Arabidopsis Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.