Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26310 | Canola | nucleus | 94.87 | 94.87 |
| CDX98155 | Canola | nucleus | 75.82 | 72.89 |
| AT1G29860.1 | Thale cress | nucleus | 74.73 | 72.34 |
| CDY43194 | Canola | nucleus | 72.89 | 71.84 |
| CDY72079 | Canola | nucleus | 20.88 | 51.35 |
| CDX76541 | Canola | nucleus | 42.86 | 39.8 |
| CDY08894 | Canola | nucleus | 42.49 | 39.46 |
| CDX77096 | Canola | nucleus | 19.78 | 37.5 |
| CDY09083 | Canola | nucleus | 42.49 | 37.06 |
| CDX90417 | Canola | nucleus | 42.49 | 37.06 |
| CDY01523 | Canola | nucleus | 42.12 | 36.86 |
| CDX78832 | Canola | nucleus | 40.29 | 35.71 |
| CDX99495 | Canola | nucleus | 40.66 | 35.58 |
| CDX83415 | Canola | nucleus, plastid | 23.44 | 34.04 |
| CDX69672 | Canola | nucleus | 18.32 | 34.01 |
| CDX97223 | Canola | nucleus | 18.32 | 34.01 |
| CDX78504 | Canola | nucleus | 18.32 | 34.01 |
| CDX70492 | Canola | nucleus | 18.32 | 34.01 |
| CDX95615 | Canola | nucleus, plastid | 23.44 | 33.68 |
| CDX77655 | Canola | nucleus | 39.56 | 33.44 |
| CDY24990 | Canola | nucleus | 20.51 | 33.14 |
| CDY33471 | Canola | nucleus | 39.19 | 33.13 |
| CDY43969 | Canola | nucleus | 38.1 | 32.81 |
| CDY05537 | Canola | nucleus | 20.15 | 32.74 |
| CDY35159 | Canola | nucleus | 38.46 | 32.71 |
| CDY03224 | Canola | nucleus | 38.1 | 32.4 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 35.16 | 32.0 |
| OQU78504 | Sorghum | nucleus | 30.4 | 31.68 |
| CDX87064 | Canola | nucleus | 19.78 | 31.58 |
| CDY48151 | Canola | nucleus | 19.78 | 31.58 |
| CDX88219 | Canola | nucleus | 19.78 | 30.68 |
| CDY52627 | Canola | nucleus | 19.78 | 30.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.87 | 30.21 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 32.6 | 30.17 |
| CDY39732 | Canola | nucleus | 19.41 | 30.11 |
| CDY44466 | Canola | nucleus | 19.41 | 30.11 |
| CDX87722 | Canola | nucleus | 34.43 | 30.03 |
| CDY30483 | Canola | nucleus | 24.18 | 30.0 |
| CDY23453 | Canola | nucleus | 23.81 | 29.82 |
| CDY71963 | Canola | nucleus | 23.08 | 29.44 |
| CDY48258 | Canola | nucleus | 23.08 | 29.3 |
| CDY34393 | Canola | nucleus | 20.15 | 28.95 |
| CDY25554 | Canola | nucleus | 19.78 | 28.72 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 30.04 | 28.67 |
| CDY38208 | Canola | nucleus | 19.41 | 28.49 |
| CDY55479 | Canola | nucleus | 19.05 | 27.96 |
| CDY54139 | Canola | nucleus | 30.4 | 27.85 |
| CDX95947 | Canola | nucleus | 29.67 | 27.55 |
| CDY40910 | Canola | nucleus | 29.67 | 27.55 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 28.94 | 27.53 |
| CDY04276 | Canola | nucleus | 28.94 | 27.53 |
| CDY37794 | Canola | nucleus | 31.5 | 27.48 |
| CDY07352 | Canola | nucleus | 28.94 | 27.34 |
| CDX80094 | Canola | nucleus | 31.5 | 27.22 |
| CDY50313 | Canola | nucleus | 30.4 | 26.86 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 28.21 | 26.74 |
| CDY51420 | Canola | nucleus | 31.5 | 26.54 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 28.57 | 26.35 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 29.67 | 26.21 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 29.67 | 25.96 |
| Os05t0583000-01 | Rice | nucleus | 31.87 | 25.82 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 28.94 | 25.73 |
| CDY27500 | Canola | nucleus | 30.77 | 25.23 |
| CDY11416 | Canola | nucleus | 27.47 | 25.17 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 19.05 | 25.0 |
| CDY18694 | Canola | nucleus | 15.75 | 24.86 |
| CDY72613 | Canola | nucleus | 29.3 | 24.77 |
| CDY05620 | Canola | nucleus | 34.8 | 24.3 |
| CDX76630 | Canola | nucleus | 26.37 | 24.24 |
| CDX85413 | Canola | nucleus | 34.07 | 23.31 |
| CDY08849 | Canola | nucleus | 17.58 | 23.3 |
| CDY14512 | Canola | nucleus | 17.58 | 23.3 |
| CDX72701 | Canola | nucleus | 23.44 | 22.7 |
| CDX81259 | Canola | nucleus | 16.48 | 22.61 |
| CDY53184 | Canola | nucleus | 24.18 | 22.53 |
| CDY12144 | Canola | nucleus | 23.81 | 22.03 |
| CDY31301 | Canola | nucleus | 15.75 | 21.83 |
| CDY41978 | Canola | nucleus | 23.44 | 21.48 |
| CDY46824 | Canola | nucleus | 15.38 | 14.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078EGD4 | EnsemblPlants:CDX99859 | ProteinID:CDX99859 | ProteinID:CDX99859.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00108581001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EC5ED1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g22810D
Coordinates
chrLK031914:+:637583..638709
Molecular Weight (calculated)
30937.3 Da
IEP (calculated)
8.704
GRAVY (calculated)
-0.892
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHKNTSFE EKSFTSLTNC LKSSLVMDYN SLEKVFNNSS PFQPISPSSM GQIANYPYLN LNPYSPIVSS SSNEADPKES LGDKISMEDH DGDQRGVGES
101: SKQLTKQGKG KGEKKEREAR VAFMTKSDID HLEDGYRWRK YGQKAVKDSP YPRSYYRCTT QKCNVKKRLE RSSQDPSIVI TTYEGKHNHP IPSGLRGPVI
201: AEHLLGNREN GLLHSFPRHH REFLMMNHSP VNYQSVGSVP YEHSRPNSSN LREVVDYGLL QDIVPSMLLK HES
101: SKQLTKQGKG KGEKKEREAR VAFMTKSDID HLEDGYRWRK YGQKAVKDSP YPRSYYRCTT QKCNVKKRLE RSSQDPSIVI TTYEGKHNHP IPSGLRGPVI
201: AEHLLGNREN GLLHSFPRHH REFLMMNHSP VNYQSVGSVP YEHSRPNSSN LREVVDYGLL QDIVPSMLLK HES
001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
Arabidopsis Description
WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.