Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72079 | Canola | nucleus | 37.63 | 100.0 |
| Bra010683.1-P | Field mustard | nucleus | 97.63 | 97.3 |
| CDY53184 | Canola | nucleus | 80.0 | 80.55 |
| CDX72701 | Canola | nucleus | 76.61 | 80.14 |
| CDY41978 | Canola | nucleus | 78.64 | 77.85 |
| AT4G39410.1 | Thale cress | nucleus | 78.64 | 76.32 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 26.1 | 74.76 |
| VIT_07s0031g01840.t01 | Wine grape | nucleus | 42.37 | 55.31 |
| KRH43340 | Soybean | nucleus | 43.05 | 54.04 |
| KRH53810 | Soybean | nucleus | 42.71 | 53.39 |
| KRH64133 | Soybean | nucleus | 42.03 | 52.99 |
| KRH59476 | Soybean | nucleus | 37.63 | 51.39 |
| PGSC0003DMT400050745 | Potato | nucleus | 40.0 | 50.43 |
| Solyc04g051540.2.1 | Tomato | nucleus | 39.66 | 50.0 |
| CDX83415 | Canola | nucleus, plastid | 30.17 | 47.34 |
| CDX95615 | Canola | nucleus, plastid | 30.17 | 46.84 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 34.24 | 42.44 |
| CDY48258 | Canola | nucleus | 30.17 | 41.4 |
| CDY71963 | Canola | nucleus | 29.83 | 41.12 |
| CDY23453 | Canola | nucleus | 30.17 | 40.83 |
| CDY30483 | Canola | nucleus | 30.17 | 40.45 |
| TraesCS3A01G116200.1 | Wheat | plastid | 35.59 | 40.08 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 35.25 | 39.69 |
| Os01t0182700-01 | Rice | nucleus | 37.29 | 39.29 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 34.92 | 39.02 |
| TraesCS3B01G135300.1 | Wheat | nucleus, plastid | 34.92 | 38.87 |
| GSMUA_Achr10P... | Banana | nucleus | 35.25 | 37.82 |
| CDX77096 | Canola | nucleus | 18.31 | 37.5 |
| CDX97223 | Canola | nucleus | 17.63 | 35.37 |
| CDX78504 | Canola | nucleus | 17.63 | 35.37 |
| CDY24990 | Canola | nucleus | 20.0 | 34.91 |
| CDX70492 | Canola | nucleus | 17.29 | 34.69 |
| CDX69672 | Canola | nucleus | 17.29 | 34.69 |
| Zm00001d039584_P001 | Maize | nucleus | 34.24 | 34.47 |
| OQU86187 | Sorghum | mitochondrion, nucleus | 34.24 | 34.24 |
| CDY05537 | Canola | nucleus | 19.32 | 33.93 |
| CDX87064 | Canola | nucleus | 18.98 | 32.75 |
| CDY48151 | Canola | nucleus | 18.64 | 32.16 |
| CDY44466 | Canola | nucleus | 18.98 | 31.82 |
| CDY39732 | Canola | nucleus | 18.98 | 31.82 |
| CDX88219 | Canola | nucleus | 18.64 | 31.25 |
| CDY52627 | Canola | nucleus | 18.64 | 31.25 |
| CDY38208 | Canola | nucleus | 18.98 | 30.11 |
| CDY34393 | Canola | nucleus | 19.32 | 30.0 |
| CDY25554 | Canola | nucleus | 18.98 | 29.79 |
| CDY55479 | Canola | nucleus | 18.64 | 29.57 |
| CDY18694 | Canola | nucleus | 16.95 | 28.9 |
| CDY14512 | Canola | nucleus | 18.31 | 26.21 |
| CDY08849 | Canola | nucleus | 18.31 | 26.21 |
| CDY31301 | Canola | nucleus | 16.95 | 25.38 |
| CDX81259 | Canola | nucleus | 16.95 | 25.13 |
| CDX76541 | Canola | nucleus | 24.41 | 24.49 |
| CDY43194 | Canola | nucleus | 22.37 | 23.83 |
| CDX99859 | Canola | nucleus | 22.03 | 23.81 |
| CDY08894 | Canola | nucleus | 23.73 | 23.81 |
| CDY09083 | Canola | nucleus | 25.08 | 23.64 |
| CDX90417 | Canola | nucleus | 25.08 | 23.64 |
| CDX98155 | Canola | nucleus | 22.71 | 23.59 |
| CDY26310 | Canola | nucleus | 21.69 | 23.44 |
| CDY01523 | Canola | nucleus | 24.75 | 23.4 |
| CDY40910 | Canola | nucleus | 23.05 | 23.13 |
| CDY37794 | Canola | nucleus | 24.41 | 23.0 |
| CDX95947 | Canola | nucleus | 22.71 | 22.79 |
| CDX80094 | Canola | nucleus | 24.41 | 22.78 |
| CDX99495 | Canola | nucleus | 23.73 | 22.44 |
| CDX78832 | Canola | nucleus | 23.39 | 22.4 |
| CDY04276 | Canola | nucleus | 21.69 | 22.3 |
| CDY54139 | Canola | nucleus | 22.37 | 22.15 |
| CDY07352 | Canola | nucleus | 21.69 | 22.15 |
| CDY72613 | Canola | nucleus | 24.07 | 21.98 |
| CDY33471 | Canola | nucleus | 24.07 | 21.98 |
| CDX77655 | Canola | nucleus | 23.73 | 21.67 |
| CDY03224 | Canola | nucleus | 23.39 | 21.5 |
| CDY35159 | Canola | nucleus | 23.39 | 21.5 |
| CDY43969 | Canola | nucleus | 23.05 | 21.45 |
| CDY11416 | Canola | nucleus | 21.36 | 21.14 |
| CDX76630 | Canola | nucleus | 21.02 | 20.88 |
| CDY50313 | Canola | nucleus | 21.69 | 20.71 |
| CDX87722 | Canola | nucleus | 21.69 | 20.45 |
| CDY51420 | Canola | nucleus | 22.03 | 20.06 |
| CDY27500 | Canola | nucleus | 21.69 | 19.22 |
| CDY05620 | Canola | nucleus | 24.07 | 18.16 |
| CDX85413 | Canola | nucleus | 23.39 | 17.29 |
| CDY46824 | Canola | nucleus | 16.27 | 16.55 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078FGK1 | UniProt:A0A078FGK1 | EnsemblPlants:CDY12144 | ProteinID:CDY12144 |
| ProteinID:CDY12144.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00061142001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF47 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDC588 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g60600DBnaC03g60600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGK1]
Coordinates
chrLK032017:-:851848..854175
Molecular Weight (calculated)
33786.1 Da
IEP (calculated)
7.828
GRAVY (calculated)
-0.952
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTINQGVSL FDEPQNIINT NNTNTLGFFF SFPNHTLSSS SSPSSLVSPF LGHHSFNSFI HNNSPSFVTH PRDPINPMAN LPETLISISS LASSKQRHDH
101: EGIVNLDQHR LTDISSQRPS LNPWAWSSQA GYEYNKKNNH TSEIDVDHNI DDDGCDGDGG NDDDDHQHHE TRRHKINTSP LGIMSTLKMK KPKTRKKVRE
201: PRFCFKTLSD VDVLDDGYRW RKYGQKVVKN TQHPRSYYRC TQEKCRVKKR VERLADDPRM VITTYEGRHL HSPSNHLDDD PLSSSHHSPL SNFFW
101: EGIVNLDQHR LTDISSQRPS LNPWAWSSQA GYEYNKKNNH TSEIDVDHNI DDDGCDGDGG NDDDDHQHHE TRRHKINTSP LGIMSTLKMK KPKTRKKVRE
201: PRFCFKTLSD VDVLDDGYRW RKYGQKVVKN TQHPRSYYRC TQEKCRVKKR VERLADDPRM VITTYEGRHL HSPSNHLDDD PLSSSHHSPL SNFFW
001: MGAINQGISL FDESQTVINP INTNHLGFFF SFPSHSTLSS SSSSSSSSPS SLVSPFLGHN SLNSFLHNNP SSFISHPQDS INLMTNLPET LISSLSSSKQ
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
Arabidopsis Description
WRKY13WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.