Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72079 | Canola | nucleus | 33.55 | 91.89 |
| CDY53184 | Canola | nucleus | 78.29 | 81.23 |
| Bra033616.1-P | Field mustard | nucleus | 77.96 | 81.16 |
| CDX72701 | Canola | nucleus | 73.68 | 79.43 |
| CDY12144 | Canola | nucleus | 76.32 | 78.64 |
| Bra010683.1-P | Field mustard | nucleus | 76.32 | 78.38 |
| CDY41978 | Canola | nucleus | 76.64 | 78.19 |
| Bra011861.1-P | Field mustard | nucleus | 76.64 | 78.19 |
| GSMUA_Achr5P06260_001 | Banana | nucleus | 25.99 | 76.7 |
| VIT_07s0031g01840.t01 | Wine grape | nucleus | 42.43 | 57.08 |
| KRH43340 | Soybean | nucleus | 43.09 | 55.74 |
| KRH59476 | Soybean | nucleus | 38.16 | 53.7 |
| Solyc04g051540.2.1 | Tomato | nucleus | 41.12 | 53.42 |
| KRH64133 | Soybean | nucleus | 40.79 | 52.99 |
| KRH53810 | Soybean | nucleus | 41.12 | 52.97 |
| PGSC0003DMT400050745 | Potato | nucleus | 40.46 | 52.56 |
| GSMUA_Achr7P13310_001 | Banana | nucleus | 35.2 | 44.96 |
| AT2G46130.1 | Thale cress | nucleus | 16.12 | 44.95 |
| AT2G44745.1 | Thale cress | nucleus | 30.92 | 43.12 |
| TraesCS3A01G116200.1 | Wheat | plastid | 36.51 | 42.37 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 35.86 | 41.6 |
| TraesCS3B01G135300.1 | Wheat | nucleus, plastid | 36.18 | 41.51 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 35.53 | 40.91 |
| Os01t0182700-01 | Rice | nucleus | 36.18 | 39.29 |
| Zm00001d039584_P001 | Maize | nucleus | 35.2 | 36.52 |
| GSMUA_Achr10P... | Banana | nucleus | 32.89 | 36.36 |
| OQU86187 | Sorghum | mitochondrion, nucleus | 34.54 | 35.59 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 16.78 | 35.17 |
| AT3G01970.1 | Thale cress | nucleus | 16.45 | 34.01 |
| AT5G26170.1 | Thale cress | nucleus | 18.42 | 32.37 |
| AT5G41570.1 | Thale cress | nucleus | 18.42 | 31.28 |
| AT1G64000.1 | Thale cress | nucleus | 18.75 | 29.23 |
| AT5G64810.1 | Thale cress | nucleus | 18.09 | 28.35 |
| AT1G29860.1 | Thale cress | nucleus | 23.68 | 25.53 |
| AT4G18170.1 | Thale cress | nucleus | 25.33 | 24.21 |
| AT1G69310.2 | Thale cress | nucleus | 22.04 | 23.34 |
| AT5G46350.1 | Thale cress | nucleus | 25.0 | 23.31 |
| AT3G62340.1 | Thale cress | nucleus | 20.72 | 22.74 |
| AT2G47260.1 | Thale cress | nucleus | 24.67 | 22.26 |
| AT5G49520.1 | Thale cress | nucleus | 23.03 | 17.54 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:830096 | UniProt:A0A178UV80 | EMBL:AB493729 | ProteinID:AEE87071.1 |
| EMBL:AF421153 | ArrayExpress:AT4G39410 | EnsemblPlantsGene:AT4G39410 | RefSeq:AT4G39410 | TAIR:AT4G39410 | RefSeq:AT4G39410-TAIR-G |
| EnsemblPlants:AT4G39410.1 | TAIR:AT4G39410.1 | UniProt:C0SVM6 | ProteinID:CAB44676.1 | ProteinID:CAB80604.1 | GO:GO:0000978 |
| GO:GO:0001046 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019748 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:1901141 | GO:GO:1904369 |
| InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_195651.1 | ProteinID:OAO97748.1 | PFAM:PF03106 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF47 |
| UniProt:Q9SVB7 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000AC965 | Symbol:WRKY13 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
WRKY13WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]
Coordinates
chr4:-:18332606..18334893
Molecular Weight (calculated)
34205.4 Da
IEP (calculated)
7.597
GRAVY (calculated)
-0.849
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAINQGISL FDESQTVINP INTNHLGFFF SFPSHSTLSS SSSSSSSSPS SLVSPFLGHN SLNSFLHNNP SSFISHPQDS INLMTNLPET LISSLSSSKQ
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
101: RDDHDGFLNL DHHRLTGSIS SQRPLSNPWA WSCQAGYGSS QKNNHGSEID VDDNDDEVGD GGGINDDDNG RHHHHDTPSR HDKHNTASLG VVSSLKMKKL
201: KTRRKVREPR FCFKTLSEVD VLDDGYRWRK YGQKVVKNTQ HPRSYYRCTQ DKCRVKKRVE RLADDPRMVI TTYEGRHLHS PSNHLDDDSL STSHLHPPLS
301: NFFW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.