Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032340.1-P | Field mustard | nucleus | 72.69 | 75.09 |
| CDY26310 | Canola | nucleus | 72.69 | 75.09 |
| CDX99859 | Canola | nucleus | 72.34 | 74.73 |
| CDX98155 | Canola | nucleus | 73.76 | 73.24 |
| Bra030178.1-P | Field mustard | nucleus | 70.21 | 71.48 |
| CDY43194 | Canola | nucleus | 70.21 | 71.48 |
| AT2G46130.1 | Thale cress | nucleus | 18.44 | 47.71 |
| AT4G18170.1 | Thale cress | nucleus | 43.62 | 38.68 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 19.5 | 37.93 |
| AT3G01970.1 | Thale cress | nucleus | 18.79 | 36.05 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 38.3 | 36.0 |
| OQU78504 | Sorghum | nucleus | 31.56 | 33.97 |
| AT5G46350.1 | Thale cress | nucleus | 39.01 | 33.74 |
| AT5G26170.1 | Thale cress | nucleus | 20.21 | 32.95 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 33.69 | 32.2 |
| AT2G44745.1 | Thale cress | nucleus | 24.47 | 31.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.27 | 31.6 |
| AT1G69310.2 | Thale cress | nucleus | 31.91 | 31.36 |
| AT5G41570.1 | Thale cress | nucleus | 19.86 | 31.28 |
| AT2G47260.1 | Thale cress | nucleus | 35.82 | 29.97 |
| AT3G62340.1 | Thale cress | nucleus | 29.43 | 29.96 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 30.14 | 29.72 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 29.79 | 29.27 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 29.08 | 28.47 |
| AT1G64000.1 | Thale cress | nucleus | 19.5 | 28.21 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 30.85 | 28.16 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 30.14 | 27.69 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 28.72 | 27.36 |
| AT5G64810.1 | Thale cress | nucleus | 18.79 | 27.32 |
| Os05t0583000-01 | Rice | nucleus | 32.62 | 27.3 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 30.14 | 27.24 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 19.86 | 26.92 |
| AT5G49520.1 | Thale cress | nucleus | 33.69 | 23.81 |
| AT4G39410.1 | Thale cress | nucleus | 25.53 | 23.68 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:839864 | UniProt:A0A178WJ30 | ProteinID:AAG10610.1 | EMBL:AB493486 |
| ProteinID:AEE31143.1 | EMBL:AF421158 | ArrayExpress:AT1G29860 | EnsemblPlantsGene:AT1G29860 | RefSeq:AT1G29860 | TAIR:AT1G29860 |
| RefSeq:AT1G29860-TAIR-G | EnsemblPlants:AT1G29860.1 | TAIR:AT1G29860.1 | UniProt:C0SUY3 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010228 |
| GO:GO:0043565 | GO:GO:0045893 | GO:GO:1990837 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_174279.1 |
| ProteinID:OAP17473.1 | PFAM:PF03106 | PIRSF:PIRSF038130 | PO:PO:0009047 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF56 | UniProt:Q93WV4 | SMART:SM00774 | SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI00000ACCE8 |
| Symbol:WRKY71 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
Coordinates
chr1:+:10454433..10455874
Molecular Weight (calculated)
31957.0 Da
IEP (calculated)
7.495
GRAVY (calculated)
-0.932
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.