Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030178.1-P | Field mustard | nucleus | 99.64 | 99.64 |
| CDX98155 | Canola | nucleus | 92.78 | 90.49 |
| CDY26310 | Canola | nucleus | 72.2 | 73.26 |
| CDX99859 | Canola | nucleus | 71.84 | 72.89 |
| AT1G29860.1 | Thale cress | nucleus | 71.48 | 70.21 |
| CDY72079 | Canola | nucleus | 21.66 | 54.05 |
| CDX77096 | Canola | nucleus | 20.58 | 39.58 |
| CDX76541 | Canola | nucleus | 41.52 | 39.12 |
| CDY08894 | Canola | nucleus | 41.16 | 38.78 |
| CDX70492 | Canola | nucleus | 19.86 | 37.41 |
| CDX90417 | Canola | nucleus | 42.24 | 37.38 |
| CDY09083 | Canola | nucleus | 42.24 | 37.38 |
| CDY01523 | Canola | nucleus | 41.88 | 37.18 |
| CDX78504 | Canola | nucleus | 19.49 | 36.73 |
| CDX97223 | Canola | nucleus | 19.49 | 36.73 |
| CDX69672 | Canola | nucleus | 19.49 | 36.73 |
| CDX78832 | Canola | nucleus | 40.07 | 36.04 |
| CDX99495 | Canola | nucleus | 39.71 | 35.26 |
| CDY35159 | Canola | nucleus | 40.43 | 34.89 |
| CDY03224 | Canola | nucleus | 39.71 | 34.27 |
| CDY33471 | Canola | nucleus | 39.71 | 34.06 |
| CDX77655 | Canola | nucleus | 39.71 | 34.06 |
| OQU78504 | Sorghum | nucleus | 31.77 | 33.59 |
| CDX83415 | Canola | nucleus, plastid | 22.74 | 33.51 |
| CDY43969 | Canola | nucleus | 38.27 | 33.44 |
| GSMUA_Achr6P27090_001 | Banana | nucleus | 36.1 | 33.33 |
| CDX95615 | Canola | nucleus, plastid | 22.74 | 33.16 |
| CDY24990 | Canola | nucleus | 19.86 | 32.54 |
| CDX87064 | Canola | nucleus | 19.86 | 32.16 |
| CDY48151 | Canola | nucleus | 19.86 | 32.16 |
| CDY05537 | Canola | nucleus | 19.49 | 32.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.85 | 31.6 |
| CDX88219 | Canola | nucleus | 19.86 | 31.25 |
| CDY52627 | Canola | nucleus | 19.86 | 31.25 |
| GSMUA_Achr9P06750_001 | Banana | nucleus | 33.21 | 31.19 |
| CDY44466 | Canola | nucleus | 19.49 | 30.68 |
| CDY39732 | Canola | nucleus | 19.49 | 30.68 |
| CDY23453 | Canola | nucleus | 23.83 | 30.28 |
| CDX87722 | Canola | nucleus | 33.94 | 30.03 |
| CDY30483 | Canola | nucleus | 23.83 | 30.0 |
| CDY71963 | Canola | nucleus | 23.1 | 29.91 |
| CDY48258 | Canola | nucleus | 23.1 | 29.77 |
| CDY34393 | Canola | nucleus | 20.22 | 29.47 |
| CDY37794 | Canola | nucleus | 33.21 | 29.39 |
| TraesCS1A01G421800.1 | Wheat | nucleus | 30.32 | 29.37 |
| CDY25554 | Canola | nucleus | 19.86 | 29.26 |
| CDX80094 | Canola | nucleus | 33.21 | 29.11 |
| TraesCS1B01G453200.1 | Wheat | nucleus | 29.96 | 28.92 |
| CDY54139 | Canola | nucleus | 31.05 | 28.86 |
| CDX95947 | Canola | nucleus | 30.32 | 28.57 |
| CDY04276 | Canola | nucleus | 29.6 | 28.57 |
| CDY38208 | Canola | nucleus | 19.13 | 28.49 |
| CDY07352 | Canola | nucleus | 29.6 | 28.37 |
| CDY40910 | Canola | nucleus | 29.96 | 28.23 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 29.24 | 28.12 |
| CDY55479 | Canola | nucleus | 18.77 | 27.96 |
| CDY50313 | Canola | nucleus | 31.05 | 27.83 |
| CDY51420 | Canola | nucleus | 32.49 | 27.78 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 30.69 | 27.51 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 29.24 | 27.36 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 29.96 | 27.04 |
| TraesCS1A01G421900.1 | Wheat | nucleus | 20.22 | 26.92 |
| CDY11416 | Canola | nucleus | 28.88 | 26.85 |
| CDY27500 | Canola | nucleus | 32.13 | 26.73 |
| Os05t0583000-01 | Rice | nucleus | 32.49 | 26.71 |
| TraesCS1B01G453300.1 | Wheat | nucleus | 29.96 | 26.6 |
| CDY18694 | Canola | nucleus | 16.25 | 26.01 |
| CDX76630 | Canola | nucleus | 27.8 | 25.93 |
| CDY72613 | Canola | nucleus | 29.6 | 25.39 |
| CDY05620 | Canola | nucleus | 33.94 | 24.04 |
| CDX85413 | Canola | nucleus | 34.3 | 23.81 |
| CDY08849 | Canola | nucleus | 17.69 | 23.79 |
| CDY14512 | Canola | nucleus | 17.69 | 23.79 |
| CDX72701 | Canola | nucleus | 23.47 | 23.05 |
| CDX81259 | Canola | nucleus | 16.25 | 22.61 |
| CDY53184 | Canola | nucleus | 23.83 | 22.53 |
| CDY12144 | Canola | nucleus | 23.83 | 22.37 |
| CDY31301 | Canola | nucleus | 15.88 | 22.34 |
| CDY41978 | Canola | nucleus | 23.83 | 22.15 |
| CDY46824 | Canola | nucleus | 15.52 | 14.83 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078I0V3 | UniProt:A0A078I0V3 | EnsemblPlants:CDY43194 | ProteinID:CDY43194 |
| ProteinID:CDY43194.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00076195001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF56 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE259D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g07600DBnaA07g07600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0V3]
Coordinates
chrLK032548:+:91961..93405
Molecular Weight (calculated)
31586.0 Da
IEP (calculated)
8.277
GRAVY (calculated)
-0.907
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDQVDHKNT CLDEVIFTSV ADCLQSSLEK AFKFSLYNYP CQPISPSNMG QIVNYRYLNL NPNSPIVSSS SNEADPKENV GDKSGPMEDH NEGDQHGVGE
101: TSKQLRKQGK GKGEKKEREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PYPRSYYRCT TQKCNVKKRV ERSFQDPLIV ITTYEGKHYH PIPSTLRGPM
201: VGENLLGHHG SAILHSFPRY HQEFLMKNQH PVNYQSAGTV TYQRCHGDST NYSNHQQVID CGLLQDIVPS KFLKHES
101: TSKQLRKQGK GKGEKKEREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PYPRSYYRCT TQKCNVKKRV ERSFQDPLIV ITTYEGKHYH PIPSTLRGPM
201: VGENLLGHHG SAILHSFPRY HQEFLMKNQH PVNYQSAGTV TYQRCHGDST NYSNHQQVID CGLLQDIVPS KFLKHES
001: MDDHVEHNYN TSLEEVHFKS LSDCLQSSLV MDYNSLEKVF KFSPYSSPFQ SVSPSVNNPY LNLTSNSPVV SSSSNEGEPK ENTNDKSDQM EDNEGDLHGV
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
101: GESSKQLTKQ GKKKGEKKER EVRVAFMTKS EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCNVKK RVERSFQDPS IVITTYEGKH NHPIPSTLRG
201: TVAAEHLLVH RGGGGSLLHS FPRHHQDFLM MKHSPANYQS VGSLSYEHGH GTSSYNFNNN QPVVDYGLLQ DIVPSMFSKN ES
Arabidopsis Description
WRKY71Probable WRKY transcription factor 71 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.