Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13080.1 | CDY04768 | AT1G22920.1 | 21798944 |
| AT5G13080.1 | CDY21400 | AT1G22920.1 | 21798944 |
| AT5G13080.1 | CDY25761 | AT1G22920.1 | 21798944 |
| AT5G13080.1 | CDX95531 | AT3G18360.1 | 21798944 |
| AT5G13080.1 | CDY18516 | AT3G18360.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006178.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX70492 | Canola | nucleus | 97.96 | 97.96 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 87.07 | 88.28 |
| CDX69672 | Canola | nucleus | 87.07 | 87.07 |
| CDX97223 | Canola | nucleus | 86.39 | 86.39 |
| GSMUA_Achr9P07230_001 | Banana | mitochondrion | 48.98 | 62.61 |
| Solyc05g015850.2.1 | Tomato | nucleus | 66.67 | 56.98 |
| PGSC0003DMT400056352 | Potato | nucleus | 66.67 | 56.98 |
| CDX77096 | Canola | nucleus | 50.34 | 51.39 |
| VIT_01s0010g03930.t01 | Wine grape | nucleus, plastid | 60.54 | 47.09 |
| VIT_14s0068g01770.t01 | Wine grape | nucleus | 57.82 | 46.7 |
| KRG94564 | Soybean | nucleus | 59.18 | 46.28 |
| CDY72079 | Canola | nucleus | 33.33 | 44.14 |
| CDY44466 | Canola | nucleus | 45.58 | 38.07 |
| CDY39732 | Canola | nucleus | 45.58 | 38.07 |
| CDY25554 | Canola | nucleus | 46.26 | 36.17 |
| CDY38208 | Canola | nucleus | 45.58 | 36.02 |
| CDY34393 | Canola | nucleus | 46.26 | 35.79 |
| CDY55479 | Canola | nucleus | 44.9 | 35.48 |
| CDY24990 | Canola | nucleus | 33.33 | 28.99 |
| CDY05537 | Canola | nucleus | 32.65 | 28.57 |
| CDX87064 | Canola | nucleus | 32.65 | 28.07 |
| CDY48151 | Canola | nucleus | 31.97 | 27.49 |
| CDX88219 | Canola | nucleus | 32.65 | 27.27 |
| CDY18694 | Canola | nucleus | 31.97 | 27.17 |
| CDY52627 | Canola | nucleus | 31.97 | 26.7 |
| CDX83415 | Canola | nucleus, plastid | 33.33 | 26.06 |
| CDX95615 | Canola | nucleus, plastid | 33.33 | 25.79 |
| CDX81259 | Canola | nucleus | 32.65 | 24.12 |
| CDY71963 | Canola | nucleus | 34.69 | 23.83 |
| CDY48258 | Canola | nucleus | 34.69 | 23.72 |
| CDY30483 | Canola | nucleus | 34.69 | 23.18 |
| CDY23453 | Canola | nucleus | 34.01 | 22.94 |
| CDY31301 | Canola | nucleus | 30.61 | 22.84 |
| CDY14512 | Canola | nucleus | 31.97 | 22.82 |
| CDY08849 | Canola | nucleus | 31.97 | 22.82 |
| CDY04276 | Canola | nucleus | 39.46 | 20.21 |
| CDY07352 | Canola | nucleus | 39.46 | 20.07 |
| CDY43194 | Canola | nucleus | 36.73 | 19.49 |
| CDY08894 | Canola | nucleus | 38.1 | 19.05 |
| CDY37794 | Canola | nucleus | 40.14 | 18.85 |
| CDX95947 | Canola | nucleus | 37.41 | 18.71 |
| CDY26310 | Canola | nucleus | 34.69 | 18.68 |
| CDX80094 | Canola | nucleus | 40.14 | 18.67 |
| CDX98155 | Canola | nucleus | 36.05 | 18.66 |
| CDX78832 | Canola | nucleus | 38.78 | 18.51 |
| CDY54139 | Canola | nucleus | 37.41 | 18.46 |
| CDX72701 | Canola | nucleus | 35.37 | 18.44 |
| CDY40910 | Canola | nucleus | 36.73 | 18.37 |
| CDX76541 | Canola | nucleus | 36.73 | 18.37 |
| CDX99859 | Canola | nucleus | 34.01 | 18.32 |
| CDY11416 | Canola | nucleus | 36.73 | 18.12 |
| CDY72613 | Canola | nucleus | 39.46 | 17.96 |
| CDX99495 | Canola | nucleus | 38.1 | 17.95 |
| CDY51420 | Canola | nucleus | 39.46 | 17.9 |
| CDY53184 | Canola | nucleus | 35.37 | 17.75 |
| CDY01523 | Canola | nucleus | 37.41 | 17.63 |
| CDY12144 | Canola | nucleus | 35.37 | 17.63 |
| CDY09083 | Canola | nucleus | 37.41 | 17.57 |
| CDX90417 | Canola | nucleus | 37.41 | 17.57 |
| CDX76630 | Canola | nucleus | 35.37 | 17.51 |
| CDY50313 | Canola | nucleus | 36.73 | 17.48 |
| CDY27500 | Canola | nucleus | 39.46 | 17.42 |
| CDY41978 | Canola | nucleus | 34.69 | 17.11 |
| CDY43969 | Canola | nucleus | 36.05 | 16.72 |
| CDX77655 | Canola | nucleus | 36.05 | 16.41 |
| CDY35159 | Canola | nucleus | 34.69 | 15.89 |
| CDY03224 | Canola | nucleus | 34.69 | 15.89 |
| CDY05620 | Canola | nucleus | 42.18 | 15.86 |
| CDY33471 | Canola | nucleus | 34.69 | 15.79 |
| CDX87722 | Canola | nucleus | 33.33 | 15.65 |
| CDX85413 | Canola | nucleus | 42.18 | 15.54 |
| CDY46824 | Canola | nucleus | 29.93 | 15.17 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | unigene:Bna.29080 | GO:C4N0Y0 | UniProt:C4N0Y0 | EnsemblPlants:CDX78504 |
| ProteinID:CDX78504 | ProteinID:CDX78504.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00129904001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF25 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0001A647B1 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | : | : | : | : | : |
Description
BnaA03g04160DBnaA03g04160D protein [Source:UniProtKB/TrEMBL;Acc:C4N0Y0]
Coordinates
chrLK031815:-:1041231..1042412
Molecular Weight (calculated)
17086.9 Da
IEP (calculated)
9.648
GRAVY (calculated)
-0.990
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGYQNGSSY APFLSLTSHQ NHSKLEFHQG EEEASKVREG SSRSLEVKKK GKKQRFAFQT RSQVDILDDG YRWRKYGQKA VKNNTFPRSY YRCTYAGCNV
101: KKQVQRLTSD QEVVVTTYEG VHSHAIEKST ENFEHILTQM QIYSSFN
101: KKQVQRLTSD QEVVVTTYEG VHSHAIEKST ENFEHILTQM QIYSSFN
001: MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
Arabidopsis Description
WRKY75WRKY75 [Source:UniProtKB/TrEMBL;Acc:A0A178UJF4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.