Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020546.1-P | Field mustard | nucleus | 97.63 | 98.21 |
| CDY05537 | Canola | nucleus | 97.04 | 97.62 |
| CDX87064 | Canola | nucleus | 83.43 | 82.46 |
| CDY48151 | Canola | nucleus | 81.66 | 80.7 |
| CDX88219 | Canola | nucleus | 81.07 | 77.84 |
| CDY52627 | Canola | nucleus | 80.47 | 77.27 |
| AT5G26170.1 | Thale cress | nucleus | 78.7 | 76.88 |
| KRH15622 | Soybean | nucleus | 27.22 | 67.65 |
| KRH61557 | Soybean | nucleus | 50.89 | 53.42 |
| GSMUA_Achr3P20450_001 | Banana | cytosol, nucleus, plastid | 29.59 | 53.19 |
| KRH52231 | Soybean | nucleus | 48.52 | 50.93 |
| KRH05396 | Soybean | nucleus | 46.15 | 47.56 |
| CDY72079 | Canola | nucleus | 30.77 | 46.85 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 45.56 | 46.39 |
| Solyc08g062490.2.1 | Tomato | nucleus | 40.24 | 37.57 |
| CDX77096 | Canola | nucleus | 28.99 | 34.03 |
| CDX69672 | Canola | nucleus | 28.99 | 33.33 |
| CDX70492 | Canola | nucleus | 28.99 | 33.33 |
| CDX78504 | Canola | nucleus | 28.99 | 33.33 |
| CDX97223 | Canola | nucleus | 28.99 | 33.33 |
| PGSC0003DMT400021144 | Potato | nucleus | 24.85 | 32.81 |
| CDY18694 | Canola | nucleus | 33.14 | 32.37 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 37.87 | 31.68 |
| Os01t0186000-01 | Rice | cytosol, nucleus | 36.09 | 31.61 |
| Zm00001d011133_P001 | Maize | plastid | 36.09 | 31.12 |
| Zm00001d037607_P001 | Maize | nucleus | 35.5 | 30.77 |
| Zm00001d009939_P001 | Maize | nucleus | 37.28 | 30.73 |
| CDX81259 | Canola | nucleus | 35.5 | 30.15 |
| CDY08849 | Canola | nucleus | 36.69 | 30.1 |
| CDY14512 | Canola | nucleus | 36.69 | 30.1 |
| EES19157 | Sorghum | nucleus | 36.69 | 30.1 |
| CDX83415 | Canola | nucleus, plastid | 33.14 | 29.79 |
| CDX95615 | Canola | nucleus, plastid | 33.14 | 29.47 |
| CDY31301 | Canola | nucleus | 34.32 | 29.44 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 33.73 | 29.38 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 34.32 | 29.15 |
| TraesCS3B01G277300.1 | Wheat | plastid | 34.32 | 29.0 |
| Os05t0183100-01 | Rice | nucleus | 36.09 | 28.77 |
| Zm00001d043663_P001 | Maize | plastid | 35.5 | 28.44 |
| EES18577 | Sorghum | plastid | 36.69 | 28.31 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 34.32 | 28.29 |
| TraesCS3A01G248700.1 | Wheat | plastid | 33.73 | 28.08 |
| KXG33244 | Sorghum | plastid | 36.69 | 27.56 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 31.95 | 27.55 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 34.32 | 27.36 |
| CDY39732 | Canola | nucleus | 28.4 | 27.27 |
| CDY44466 | Canola | nucleus | 28.4 | 27.27 |
| Os05t0537100-00 | Rice | cytosol, plastid | 35.5 | 27.15 |
| Zm00001d038843_P001 | Maize | plastid | 35.5 | 27.15 |
| HORVU0Hr1G001430.1 | Barley | plastid | 34.91 | 27.06 |
| TraesCS1B01G374700.1 | Wheat | nucleus, plastid | 35.5 | 26.91 |
| CDY34393 | Canola | nucleus | 30.18 | 26.84 |
| TraesCS1A01G358400.1 | Wheat | plastid | 34.91 | 26.82 |
| CDY25554 | Canola | nucleus | 29.59 | 26.6 |
| TraesCS1A01G358100.1 | Wheat | nucleus, plastid | 34.32 | 26.36 |
| TraesCS1B01G374900.1 | Wheat | plastid | 34.32 | 26.36 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 34.32 | 26.36 |
| CDY38208 | Canola | nucleus | 28.99 | 26.34 |
| CDY55479 | Canola | nucleus | 28.99 | 26.34 |
| TraesCS1D01G363300.1 | Wheat | plastid | 34.32 | 26.01 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 34.32 | 25.78 |
| CDY71963 | Canola | nucleus | 32.54 | 25.7 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 33.73 | 25.56 |
| CDY30483 | Canola | nucleus | 33.14 | 25.45 |
| CDY23453 | Canola | nucleus | 32.54 | 25.23 |
| CDY48258 | Canola | nucleus | 31.95 | 25.12 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 32.54 | 24.77 |
| Os01t0714800-01 | Rice | plastid | 35.5 | 24.49 |
| Zm00001d008793_P001 | Maize | nucleus | 32.54 | 24.02 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 34.91 | 23.98 |
| EES00157 | Sorghum | nucleus | 32.54 | 21.15 |
| CDY26310 | Canola | nucleus | 33.73 | 20.88 |
| Zm00001d039531_P001 | Maize | nucleus | 33.73 | 20.88 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 34.32 | 20.79 |
| CDX99859 | Canola | nucleus | 33.14 | 20.51 |
| CDX98155 | Canola | nucleus | 34.32 | 20.42 |
| CDY12144 | Canola | nucleus | 34.91 | 20.0 |
| CDY46824 | Canola | nucleus | 34.32 | 20.0 |
| CDX72701 | Canola | nucleus | 33.14 | 19.86 |
| CDY43194 | Canola | nucleus | 32.54 | 19.86 |
| CDY41978 | Canola | nucleus | 34.32 | 19.46 |
| CDX76541 | Canola | nucleus | 33.73 | 19.39 |
| CDY53184 | Canola | nucleus | 33.14 | 19.11 |
| CDY08894 | Canola | nucleus | 33.14 | 19.05 |
| CDX78832 | Canola | nucleus | 34.32 | 18.83 |
| CDY04276 | Canola | nucleus | 31.95 | 18.82 |
| CDY07352 | Canola | nucleus | 31.95 | 18.69 |
| CDX99495 | Canola | nucleus | 34.32 | 18.59 |
| CDY43969 | Canola | nucleus | 34.32 | 18.3 |
| CDY54139 | Canola | nucleus | 31.95 | 18.12 |
| CDX95947 | Canola | nucleus | 31.36 | 18.03 |
| CDY40910 | Canola | nucleus | 31.36 | 18.03 |
| CDX90417 | Canola | nucleus | 33.14 | 17.89 |
| CDY09083 | Canola | nucleus | 33.14 | 17.89 |
| CDY37794 | Canola | nucleus | 33.14 | 17.89 |
| CDX80094 | Canola | nucleus | 33.14 | 17.72 |
| CDX77655 | Canola | nucleus | 33.73 | 17.65 |
| CDY33471 | Canola | nucleus | 33.73 | 17.65 |
| CDY01523 | Canola | nucleus | 32.54 | 17.63 |
| CDY11416 | Canola | nucleus | 30.77 | 17.45 |
| CDY72613 | Canola | nucleus | 32.54 | 17.03 |
| CDY51420 | Canola | nucleus | 32.54 | 16.98 |
| CDX87722 | Canola | nucleus | 31.36 | 16.93 |
| CDX76630 | Canola | nucleus | 29.59 | 16.84 |
| CDY50313 | Canola | nucleus | 30.77 | 16.83 |
| CDY03224 | Canola | nucleus | 31.95 | 16.82 |
| CDY35159 | Canola | nucleus | 31.95 | 16.82 |
| CDY27500 | Canola | nucleus | 32.54 | 16.52 |
| CDX85413 | Canola | nucleus | 33.14 | 14.04 |
| CDY05620 | Canola | nucleus | 31.95 | 13.81 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | unigene:Bna.28953 | GO:C4N1L7 | UniProt:C4N1L7 | EnsemblPlants:CDY24990 |
| ProteinID:CDY24990 | ProteinID:CDY24990.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00028796001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF83 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0001A647B7 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC02g40180DBnaC02g40180D protein [Source:UniProtKB/TrEMBL;Acc:C4N1L7]
Coordinates
chrLK032167:+:64800..65957
Molecular Weight (calculated)
18984.9 Da
IEP (calculated)
7.057
GRAVY (calculated)
-0.824
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDEETNLAR SFSDDTHSGL GLPDLYLTDE WMDDDLVSAV SGMNHSYGYQ TNVDAVFFSG SSSSFIQPTS PSTKASVASA SAETQVKKEK KKVKERVAFK
101: TRSDVEVLDD GFKWRKYGKK MVKNSPHPRN YYKCAADACP VKKRVERDKD DPSFVITTYE GSHNHSSMY
101: TRSDVEVLDD GFKWRKYGKK MVKNSPHPRN YYKCAADACP VKKRVERDKD DPSFVITTYE GSHNHSSMY
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.