Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G027700.1 | Barley | nucleus | 91.75 | 89.45 |
| TraesCS1A01G121500.1 | Wheat | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 78.87 | 78.06 |
| KRH15622 | Soybean | nucleus | 24.23 | 69.12 |
| EES19157 | Sorghum | nucleus | 65.98 | 62.14 |
| Zm00001d037607_P001 | Maize | nucleus | 62.37 | 62.05 |
| Zm00001d009939_P001 | Maize | nucleus | 63.92 | 60.49 |
| Os05t0183100-01 | Rice | nucleus | 57.73 | 52.83 |
| KRH61557 | Soybean | nucleus | 36.6 | 44.1 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 35.57 | 41.57 |
| KRH52231 | Soybean | nucleus | 34.02 | 40.99 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 40.72 | 39.11 |
| KRH05396 | Soybean | nucleus | 32.99 | 39.02 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 44.85 | 39.01 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 42.27 | 37.27 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 39.18 | 37.07 |
| Solyc08g062490.2.1 | Tomato | nucleus | 34.02 | 36.46 |
| TraesCS1D01G363300.1 | Wheat | plastid | 41.75 | 36.32 |
| CDX87064 | Canola | nucleus | 31.96 | 36.26 |
| TraesCS1D01G351600.1 | Wheat | plastid | 24.74 | 35.56 |
| CDY48151 | Canola | nucleus | 30.93 | 35.09 |
| Bra009885.1-P | Field mustard | nucleus | 31.44 | 34.66 |
| CDX88219 | Canola | nucleus | 31.44 | 34.66 |
| AT5G26170.1 | Thale cress | nucleus | 30.41 | 34.1 |
| Bra020546.1-P | Field mustard | nucleus | 29.38 | 33.93 |
| CDY24990 | Canola | nucleus | 29.38 | 33.73 |
| CDY52627 | Canola | nucleus | 30.41 | 33.52 |
| CDY05537 | Canola | nucleus | 28.87 | 33.33 |
| Bra036563.1-P | Field mustard | nucleus | 25.26 | 31.01 |
| TraesCS3D01G212700.1 | Wheat | nucleus | 36.08 | 29.29 |
| PGSC0003DMT400021144 | Potato | nucleus | 19.07 | 28.91 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 28.87 | 25.23 |
| TraesCS2D01G011700.1 | Wheat | nucleus | 26.29 | 24.76 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 25.26 | 21.4 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 24.74 | 20.34 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 27.32 | 18.6 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 26.8 | 18.06 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 24.23 | 17.94 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 26.8 | 17.57 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 27.32 | 17.1 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 26.8 | 16.94 |
| TraesCS3D01G226300.1 | Wheat | nucleus | 26.29 | 14.78 |
| TraesCS3D01G242500.1 | Wheat | nucleus | 26.8 | 14.21 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS1D01G122400 | EnsemblPlants:TraesCS1D01G122400.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:-:122899130..122899714
Molecular Weight (calculated)
21582.0 Da
IEP (calculated)
8.722
GRAVY (calculated)
-0.703
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLGLNPE GVFSSAFAHS SPFLGDHYAP PARAFIDDSD YAAQLHLHDD HQHYPFDQFE YSPPMAQVSF AGAGDDKHRS EKTIKISARV SAGRIGFRTR
101: SEVEILDDGF KWRKYGKKAV KNSPNPRNYY RCSAEGCGIK KRVERDRDDP RYVVTTYNGV HNHATPGAAA QYYCYSPPRS SPPTAYSAAG LLQF
101: SEVEILDDGF KWRKYGKKAV KNSPNPRNYY RCSAEGCGIK KRVERDRDDP RYVVTTYNGV HNHATPGAAA QYYCYSPPRS SPPTAYSAAG LLQF
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.