Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G129900.1 | Wheat | nucleus | 90.58 | 90.99 |
| TraesCS3A01G111200.1 | Wheat | nucleus | 88.79 | 88.0 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 87.44 | 79.27 |
| KRH15622 | Soybean | nucleus | 21.08 | 69.12 |
| Zm00001d037607_P001 | Maize | nucleus | 40.81 | 46.67 |
| EES19157 | Sorghum | nucleus | 41.7 | 45.15 |
| TraesCS1D01G122400.1 | Wheat | nucleus | 39.01 | 44.85 |
| Zm00001d009939_P001 | Maize | nucleus | 40.36 | 43.9 |
| KRH61557 | Soybean | nucleus | 29.6 | 40.99 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 29.6 | 39.76 |
| KRH05396 | Soybean | nucleus | 29.15 | 39.63 |
| Os05t0183100-01 | Rice | nucleus | 37.67 | 39.62 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 32.74 | 36.14 |
| KRH52231 | Soybean | nucleus | 26.01 | 36.02 |
| CDX87064 | Canola | nucleus | 27.35 | 35.67 |
| Solyc08g062490.2.1 | Tomato | nucleus | 28.7 | 35.36 |
| TraesCS1D01G362900.1 | Wheat | nucleus, plastid | 34.53 | 35.0 |
| AT5G26170.1 | Thale cress | nucleus | 26.91 | 34.68 |
| TraesCS1D01G363300.1 | Wheat | plastid | 34.53 | 34.53 |
| CDY48151 | Canola | nucleus | 26.46 | 34.5 |
| CDX88219 | Canola | nucleus | 26.91 | 34.09 |
| Bra020546.1-P | Field mustard | nucleus | 25.56 | 33.93 |
| CDY24990 | Canola | nucleus | 25.56 | 33.73 |
| Bra009885.1-P | Field mustard | nucleus | 26.46 | 33.52 |
| CDY05537 | Canola | nucleus | 25.11 | 33.33 |
| TraesCS1D01G351600.1 | Wheat | plastid | 20.18 | 33.33 |
| CDY52627 | Canola | nucleus | 25.56 | 32.39 |
| TraesCS3D01G248500.1 | Wheat | mitochondrion | 29.15 | 31.71 |
| Bra036563.1-P | Field mustard | nucleus | 22.42 | 31.65 |
| TraesCS3D01G212700.1 | Wheat | nucleus | 30.49 | 28.45 |
| PGSC0003DMT400021144 | Potato | nucleus | 15.7 | 27.34 |
| TraesCS3D01G280200.1 | Wheat | nucleus | 23.32 | 23.42 |
| TraesCS2D01G011700.1 | Wheat | nucleus | 20.63 | 22.33 |
| TraesCS2D01G390200.1 | Wheat | nucleus | 21.52 | 20.96 |
| TraesCS2D01G262100.1 | Wheat | nucleus | 24.66 | 19.3 |
| TraesCS1D01G429800.1 | Wheat | nucleus | 24.22 | 18.75 |
| TraesCS6D01G223900.1 | Wheat | cytosol | 19.73 | 18.64 |
| TraesCS1D01G430000.1 | Wheat | nucleus | 24.22 | 18.24 |
| TraesCS3D01G118100.1 | Wheat | nucleus, plastid | 21.08 | 17.94 |
| TraesCS1D01G429900.1 | Wheat | nucleus | 24.22 | 17.59 |
| TraesCS5D01G404400.1 | Wheat | nucleus | 24.22 | 17.42 |
| TraesCS3D01G242500.1 | Wheat | nucleus | 26.46 | 16.12 |
| TraesCS3D01G226300.1 | Wheat | nucleus | 24.66 | 15.94 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS3D01G113200 | EnsemblPlants:TraesCS3D01G113200.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:67351033..67351704
Molecular Weight (calculated)
23918.6 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.403
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLGLTTS HEAYYSAHPA ASSLYNFEAG DPFVAAADGA AELSFPELVE AARASDYSPL PAFGAAGGET MNMYGRSVVF PMTASYYCDG AWMFEDDAAA
101: RARGGGIGAM AGRPSGRIGF RTRSEVEVMD DGFRWRKYGK KAVKSSPNLR NYYRCSAEGC GVKKRVERDR DDPLYVLTTY DGVHNHVTPG STSSRAAPAY
201: SAPTAPAWTW SELQAAAHSS ESY
101: RARGGGIGAM AGRPSGRIGF RTRSEVEVMD DGFRWRKYGK KAVKSSPNLR NYYRCSAEGC GVKKRVERDR DDPLYVLTTY DGVHNHVTPG STSSRAAPAY
201: SAPTAPAWTW SELQAAAHSS ESY
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.