Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G111200.1 | Wheat | nucleus | 81.3 | 88.89 |
| TraesCS3D01G113200.1 | Wheat | nucleus | 79.27 | 87.44 |
| TraesCS3B01G129900.1 | Wheat | nucleus | 78.05 | 86.49 |
| KRH15622 | Soybean | nucleus | 19.51 | 70.59 |
| Zm00001d037607_P001 | Maize | nucleus | 37.4 | 47.18 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 37.8 | 46.73 |
| EES19157 | Sorghum | nucleus | 38.21 | 45.63 |
| Zm00001d009939_P001 | Maize | nucleus | 37.4 | 44.88 |
| KRH61557 | Soybean | nucleus | 28.05 | 42.86 |
| VIT_04s0008g01470.t01 | Wine grape | nucleus | 28.46 | 42.17 |
| KRH05396 | Soybean | nucleus | 27.64 | 41.46 |
| Os05t0183100-01 | Rice | nucleus | 34.55 | 40.09 |
| KRH52231 | Soybean | nucleus | 24.8 | 37.89 |
| GSMUA_Achr7P09680_001 | Banana | nucleus | 30.49 | 37.13 |
| CDX87064 | Canola | nucleus | 25.61 | 36.84 |
| CDY48151 | Canola | nucleus | 24.8 | 35.67 |
| Solyc08g062490.2.1 | Tomato | nucleus | 26.02 | 35.36 |
| AT5G26170.1 | Thale cress | nucleus | 24.8 | 35.26 |
| Bra020546.1-P | Field mustard | nucleus | 23.98 | 35.12 |
| CDY24990 | Canola | nucleus | 23.98 | 34.91 |
| CDX88219 | Canola | nucleus | 24.8 | 34.66 |
| CDY05537 | Canola | nucleus | 23.58 | 34.52 |
| Bra009885.1-P | Field mustard | nucleus | 24.39 | 34.09 |
| HORVU0Hr1G001430.1 | Barley | plastid | 30.08 | 33.95 |
| CDY52627 | Canola | nucleus | 23.58 | 32.95 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 28.05 | 32.55 |
| Bra036563.1-P | Field mustard | nucleus | 20.73 | 32.28 |
| PGSC0003DMT400021144 | Potato | nucleus | 14.63 | 28.12 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 30.89 | 27.24 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 28.86 | 26.69 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 18.7 | 23.47 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 21.14 | 22.51 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 19.92 | 21.59 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 19.51 | 20.87 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 21.54 | 20.08 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 21.95 | 18.95 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 23.58 | 18.77 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 19.51 | 16.67 |
| HORVU1Hr1G081570.1 | Barley | plastid | 20.73 | 16.67 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 23.17 | 15.66 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 18.7 | 15.23 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287KCP4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU3Hr1G020140 | EnsemblPlants:HORVU3Hr1G020140.1 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B473772 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:61369253..61370521
Molecular Weight (calculated)
25822.8 Da
IEP (calculated)
7.177
GRAVY (calculated)
-0.391
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: TTTGNVARHV ARLGSALMAA SLGLTSHEEA CYSAHPAGSS LYNFQDGEPF GAAADGAAAL SFQELVDAAR PSDYAPLPAF GAAGGEAMSM YERSVVFPMT
101: TSSYYCDGAG MFDDDAAARG RGGGVGAMAG RPSGRIGFRT RSEVEVMDDG FRWRKYGKKA VKSSPNLRNY YRCSADGCGV KKRVERDRDD PRYVLTTYDG
201: VHNHVAPGGG TPSRAAPAYS APAAPAWTWS ELHAAAAAAA HSSESY
101: TSSYYCDGAG MFDDDAAARG RGGGVGAMAG RPSGRIGFRT RSEVEVMDDG FRWRKYGKKA VKSSPNLRNY YRCSADGCGV KKRVERDRDD PRYVLTTYDG
201: VHNHVAPGGG TPSRAAPAYS APAAPAWTWS ELHAAAAAAA HSSESY
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.