Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G209800.1 | Wheat | nucleus | 76.32 | 89.04 |
| TraesCS3B01G240200.1 | Wheat | nucleus | 79.32 | 88.28 |
| TraesCS3D01G212700.1 | Wheat | nucleus | 78.2 | 87.03 |
| EES00970 | Sorghum | nucleus | 38.35 | 47.22 |
| Os01t0584900-01 | Rice | nucleus | 43.23 | 46.75 |
| HORVU1Hr1G027700.1 | Barley | nucleus | 27.07 | 36.18 |
| HORVU0Hr1G001430.1 | Barley | plastid | 27.82 | 33.95 |
| HORVU3Hr1G067510.1 | Barley | mitochondrion, plastid | 26.69 | 33.49 |
| HORVU3Hr1G020140.1 | Barley | mitochondrion | 26.69 | 28.86 |
| HORVU1Hr1G080300.1 | Barley | nucleus | 26.69 | 25.45 |
| HORVU2Hr1G001780.1 | Barley | nucleus | 18.42 | 25.0 |
| HORVU3Hr1G069660.1 | Barley | nucleus | 21.05 | 24.24 |
| HORVU2Hr1G093350.3 | Barley | nucleus | 20.3 | 23.48 |
| HORVU6Hr1G061940.1 | Barley | nucleus | 19.92 | 23.35 |
| HORVU3Hr1G021120.1 | Barley | nucleus, plastid | 19.92 | 20.08 |
| HORVU0Hr1G003340.1 | Barley | nucleus | 21.05 | 19.65 |
| HORVU5Hr1G096420.20 | Barley | mitochondrion, nucleus | 21.05 | 18.54 |
| HORVU1Hr1G088300.1 | Barley | nucleus | 19.92 | 18.4 |
| HORVU1Hr1G081570.1 | Barley | plastid | 20.68 | 17.97 |
| HORVU1Hr1G092130.1 | Barley | nucleus | 20.68 | 17.8 |
| HORVU3Hr1G060500.1 | Barley | nucleus | 22.56 | 16.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287L0P5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU3Hr1G050590 | EnsemblPlants:HORVU3Hr1G050590.3 | InterPro:IPR003657 | InterPro:IPR036576 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF43 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000B478F18 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:+:362932844..362934206
Molecular Weight (calculated)
29268.9 Da
IEP (calculated)
8.664
GRAVY (calculated)
-0.724
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSYSSLISV SPGEQIGGYA DQGDDDDMAA AANYLSSFCF DFGDEYSVGE AATASYPLHG QQQQAPTKAD SHHSGQAASI TSSQRFDNIN TSLTSSDARS
101: KGSKIAFKTR SEVEVLDDGY RWRKYGKKMV KNSPNPRYAH AAQTQSRGYA FWFSSLMKRR ATMASRNYYR CSSEGCRVKK RVERDRDDER FVITTYDGVH
201: NHLAPLPPQG CAGYSLSLAQ TRVDEGSSPL PMEGRRCFLD AMKMHAAGSL AGSSPVPAPR TLERHN
101: KGSKIAFKTR SEVEVLDDGY RWRKYGKKMV KNSPNPRYAH AAQTQSRGYA FWFSSLMKRR ATMASRNYYR CSSEGCRVKK RVERDRDDER FVITTYDGVH
201: NHLAPLPPQG CAGYSLSLAQ TRVDEGSSPL PMEGRRCFLD AMKMHAAGSL AGSSPVPAPR TLERHN
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.