Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0584900-01 | Rice | nucleus | 57.87 | 50.81 |
| TraesCS3A01G209800.1 | Wheat | nucleus | 47.69 | 45.18 |
| TraesCS3D01G212700.1 | Wheat | nucleus | 47.69 | 43.1 |
| TraesCS3B01G240200.1 | Wheat | nucleus | 47.22 | 42.68 |
| HORVU3Hr1G050590.3 | Barley | nucleus | 47.22 | 38.35 |
| EES19157 | Sorghum | nucleus | 32.87 | 34.47 |
| EES18577 | Sorghum | plastid | 33.33 | 32.88 |
| KXG33244 | Sorghum | plastid | 31.02 | 29.78 |
| EES00157 | Sorghum | nucleus | 33.33 | 27.69 |
| KXG31104 | Sorghum | nucleus | 25.0 | 22.69 |
| EES08501 | Sorghum | nucleus | 23.61 | 22.67 |
| EES19853 | Sorghum | nucleus, plastid | 25.0 | 22.41 |
| EES01425 | Sorghum | nucleus | 25.46 | 22.36 |
| KXG26824 | Sorghum | nucleus | 27.78 | 22.3 |
| OQU78504 | Sorghum | nucleus | 24.07 | 19.85 |
| OQU86187 | Sorghum | mitochondrion, nucleus | 24.54 | 17.97 |
| KXG34273 | Sorghum | mitochondrion | 22.22 | 17.65 |
| EES01107 | Sorghum | nucleus | 25.93 | 15.51 |
| EER90854 | Sorghum | nucleus | 22.69 | 14.8 |
| EES18690 | Sorghum | nucleus | 28.24 | 14.39 |
| EES03393 | Sorghum | nucleus | 25.93 | 13.66 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:8078649 | UniProt:C5XPE6 | EnsemblPlants:EES00970 | ProteinID:EES00970 |
| ProteinID:EES00970.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF82 |
| SMART:SM00774 | EnsemblPlantsGene:SORBI_3003G199400 | SUPFAM:SSF118290 | UniParc:UPI0001A84903 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| RefSeq:XP_002455850.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:52648841..52650568
Molecular Weight (calculated)
23758.2 Da
IEP (calculated)
5.805
GRAVY (calculated)
-0.758
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSYSSLLS PSRAHADDHR VLLGGDADDD DMAAVSSYLS LDDIVDDVVG GEWYRPLAEE SSSAAAAELQ PEPLLFATLQ AEDGYCVSGS GGEQSSAALA
101: NDNHDRIDLT QDGGSRRLLR SEHGKIAFKT RSDVDVLDDG YRWRKYGKKL VKNSPNPRNY YRCSSEGCRV KKRVERERDD ARFVITTYDG VHNHPAAAPP
201: RSPAYRLGEP PHGHHV
101: NDNHDRIDLT QDGGSRRLLR SEHGKIAFKT RSDVDVLDDG YRWRKYGKKL VKNSPNPRNY YRCSSEGCRV KKRVERERDD ARFVITTYDG VHNHPAAAPP
201: RSPAYRLGEP PHGHHV
001: MNDADTNLGS SFSDDTHSVF EFPELDLSDE WMDDDLVSAV SGMNQSYGYQ TSDVAGALFS GSSSCFSHPE SPSTKTYVAA TATASADNQN KKEKKKIKGR
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
101: VAFKTRSEVE VLDDGFKWRK YGKKMVKNSP HPRNYYKCSV DGCPVKKRVE RDRDDPSFVI TTYEGSHNHS SMN
Arabidopsis Description
WRKY50Probable WRKY transcription factor 50 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.