CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043663_P001	Maize	plastid	81.33	86.73
GSMUA_Achr3P20450_001	Banana	cytosol, nucleus, plastid	29.78	71.28
KRH15622	Soybean	nucleus	21.33	70.59
TraesCS3A01G248700.1	Wheat	plastid	52.0	57.64
TraesCS3B01G277300.1	Wheat	plastid	51.11	57.5
HORVU3Hr1G067510.1	Barley	mitochondrion, plastid	53.33	56.6
TraesCS3D01G248500.1	Wheat	mitochondrion	50.22	55.12
Os01t0714800-01	Rice	plastid	58.67	53.88
EES18577	Sorghum	plastid	48.89	50.23
KRH61557	Soybean	nucleus	29.33	40.99
VIT_04s0008g01470.t01	Wine grape	nucleus	29.33	39.76
Solyc08g062490.2.1	Tomato	nucleus	31.11	38.67
KRH05396	Soybean	nucleus	28.0	38.41
EES19157	Sorghum	nucleus	35.11	38.35
KRH52231	Soybean	nucleus	27.11	37.89
CDY48151	Canola	nucleus	28.0	36.84
CDX87064	Canola	nucleus	28.0	36.84
CDY24990	Canola	nucleus	27.56	36.69
Bra020546.1-P	Field mustard	nucleus	27.11	36.31
Bra009885.1-P	Field mustard	nucleus	28.0	35.8
CDX88219	Canola	nucleus	28.0	35.8
CDY05537	Canola	nucleus	26.67	35.71
AT5G26170.1	Thale cress	nucleus	26.67	34.68
CDY52627	Canola	nucleus	26.67	34.09
Bra036563.1-P	Field mustard	nucleus	23.11	32.91
EES00970	Sorghum	nucleus	29.78	31.02
EES00157	Sorghum	nucleus	33.33	28.85
PGSC0003DMT400021144	Potato	nucleus	16.0	28.12
EES08501	Sorghum	nucleus	23.56	23.56
EES19853	Sorghum	nucleus, plastid	24.44	22.82
EES01425	Sorghum	nucleus	24.89	22.76
KXG31104	Sorghum	nucleus	23.56	22.27
KXG26824	Sorghum	nucleus	26.22	21.93
OQU78504	Sorghum	nucleus	22.22	19.08
KXG34273	Sorghum	mitochondrion	22.67	18.75
OQU86187	Sorghum	mitochondrion, nucleus	23.56	17.97
EER90854	Sorghum	nucleus	24.44	16.62
EES01107	Sorghum	nucleus	24.44	15.24
EES03393	Sorghum	nucleus	24.0	13.17
EES18690	Sorghum	nucleus	24.0	12.74

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1B6Q5P6	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KXG33244	ProteinID:KXG33244
ProteinID:KXG33244.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF78	SMART:SM00774
EnsemblPlantsGene:SORBI_3003G276000	SUPFAM:SSF118290	UniParc:UPI00081AE05E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:61248940..61250384

Molecular Weight (calculated)

23960.0 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.442

Length

225 amino acids

Sequence
(BLAST)

001: MHMALSSRSS FAAADVLLPA AMAYRQPCSG GGGGPATSSY FGSRPAAPFF PFGTAAQLDV FECLSDEGGA VPAPPAAVPG AFATPPPPLP LMPAERVVPD
101: AAAGYSSHAR SAAAAAAGEG PPRRTDRIAF RVRSDDEEVL DDGYKWRKYG KKSVKNSPNP RNYYRCSTEG CSVKKRVERD KDDQRYVVTM YEGVHNHVSP
201: GTIYYATQDA ASGRFFVAGM HQPGH

Best Arabidopsis Sequence Match ( AT5G64810.1 )
(BLAST)

001: MNISQNPSPN FTYFSDENFI NPFMDNNDFS NLMFFDIDEG GNNGLIEEEI SSPTSIVSSE TFTGESGGSG SATTLSKKES TNRGSKESDQ TKETGHRVAF
101: RTRSKIDVMD DGFKWRKYGK KSVKNNINKR NYYKCSSEGC SVKKRVERDG DDAAYVITTY EGVHNHESLS NVYYNEMVLS YDHDNWNQHS LLRS

Arabidopsis Description

WRKY51Probable WRKY transcription factor 51 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.