CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018656_P001	Maize	nucleus	65.81	53.92
TraesCS2A01G261900.1	Wheat	nucleus	51.47	48.95
TraesCS2D01G262100.1	Wheat	nucleus	50.74	48.42
TraesCS2B01G280300.1	Wheat	nucleus	50.74	48.42
HORVU0Hr1G003340.1	Barley	nucleus	50.37	48.07
Os07t0111400-00	Rice	nucleus	46.32	43.45
EER90854	Sorghum	nucleus	45.22	37.16
KRH75010	Soybean	nucleus	39.71	36.36
KRH70870	Soybean	nucleus	38.97	36.18
GSMUA_Achr4P23360_001	Banana	nucleus	34.56	35.88
VIT_01s0011g00720.t01	Wine grape	nucleus	39.71	35.41
AT1G69310.2	Thale cress	nucleus	36.4	34.49
CDY07352	Canola	nucleus	36.4	34.26
Bra004370.1-P	Field mustard	nucleus	36.76	34.01
CDX95947	Canola	nucleus	36.76	34.01
Bra004002.1-P	Field mustard	nucleus	36.03	33.91
CDY04276	Canola	nucleus	35.66	33.8
CDY40910	Canola	nucleus	36.4	33.67
CDY54139	Canola	nucleus	36.76	33.56
Bra038313.1-P	Field mustard	nucleus	36.03	32.78
CDY50313	Canola	nucleus	36.4	32.04
PGSC0003DMT400072958	Potato	mitochondrion, nucleus	37.5	31.29
Solyc05g012500.2.1	Tomato	nucleus	37.5	31.19
OQU78504	Sorghum	nucleus	27.94	29.01
EES08501	Sorghum	nucleus	21.32	25.78
EES19853	Sorghum	nucleus, plastid	21.69	24.48
EES01107	Sorghum	nucleus	32.35	24.38
EES18690	Sorghum	nucleus	37.87	24.29
KXG31104	Sorghum	nucleus	20.96	23.95
EES19157	Sorghum	nucleus	18.01	23.79
EES01425	Sorghum	nucleus	21.32	23.58
EES18577	Sorghum	plastid	18.75	23.29
EES03393	Sorghum	nucleus	34.93	23.17
KXG33244	Sorghum	plastid	18.75	22.67
EES00970	Sorghum	nucleus	17.65	22.22
KXG26824	Sorghum	nucleus	21.69	21.93
EES00157	Sorghum	nucleus	19.49	20.38
OQU86187	Sorghum	mitochondrion, nucleus	20.22	18.64

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8081608	UniProt:A0A1B6Q8N5	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006024	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KXG34273	ProteinID:KXG34273	ProteinID:KXG34273.1	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF83	SMART:SM00774	EnsemblPlantsGene:SORBI_3002G008600	SUPFAM:SSF118290
UniParc:UPI00081ACBC2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:791610..795938

Molecular Weight (calculated)

29423.7 Da

IEP (calculated)

10.111

GRAVY (calculated)

-0.593

Length

272 amino acids

Sequence
(BLAST)

001: MQQAQRRPVT GRAYTLSTQH MASSPSKPPA PGKTTKSSAA GQKRARQPRF AFMTKSDVDH LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER
101: SSDDPSVVVT TYEGQHCHHT VAFPRAHHLH AALAAAGHHH MPFNFSAAAH HHHLYGTTSG VVTDHGHLPP LLLPTTPAPQ HNALNDSDNN GSPLACRTST
201: TTSSLLRPLD CNHQELLLAA AASYPLSSSA AMSSMPVPSM STTTTTSLPP PASSAVDKGL LDDMVPPAMR HG

Best Arabidopsis Sequence Match ( AT1G69310.4 )
(BLAST)

001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP

Arabidopsis Description

WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.