Factsheet for Bra004002.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07352	Canola	nucleus	98.96	98.96
CDY04276	Canola	nucleus	95.16	95.82
AT1G69310.2	Thale cress	nucleus	76.82	77.35
Bra004370.1-P	Field mustard	nucleus	77.51	76.19
Bra038313.1-P	Field mustard	nucleus	77.85	75.25
KRH75010	Soybean	nucleus	51.21	49.83
KRH70870	Soybean	nucleus	50.17	49.49
VIT_01s0011g00720.t01	Wine grape	nucleus	51.56	48.85
Bra040557.1-P	Field mustard	nucleus	20.07	40.28
Bra006178.1-P	Field mustard	nucleus	20.07	39.46
Bra008858.1-P	Field mustard	nucleus	20.07	39.46
Os03t0758000-01	Rice	nucleus, plastid	31.49	39.39
Os07t0111400-00	Rice	nucleus	38.75	38.62
GSMUA_Achr4P23360_001	Banana	nucleus	34.95	38.55
PGSC0003DMT400072958	Potato	mitochondrion, nucleus	43.25	38.34
Solyc05g012500.2.1	Tomato	nucleus	43.25	38.23
TraesCS2B01G280300.1	Wheat	nucleus	37.02	37.54
HORVU0Hr1G003340.1	Barley	nucleus	36.68	37.19
TraesCS2A01G261900.1	Wheat	nucleus	35.99	36.36
TraesCS2D01G262100.1	Wheat	nucleus	35.64	36.14
KXG34273	Sorghum	mitochondrion	33.91	36.03
TraesCS5B01G399900.1	Wheat	nucleus	37.37	34.73
TraesCS5A01G395100.1	Wheat	nucleus	37.02	34.52
TraesCS5D01G404400.1	Wheat	nucleus	37.02	34.52
Zm00001d018656_P001	Maize	nucleus	38.41	33.43
HORVU5Hr1G096420.20	Barley	mitochondrion, nucleus	34.6	33.11
EER90854	Sorghum	nucleus	37.72	32.93
Bra020546.1-P	Field mustard	nucleus	19.03	32.74
Bra025490.1-P	Field mustard	nucleus	18.69	31.03
Zm00001d034073_P001	Maize	nucleus	35.29	30.82
Bra009885.1-P	Field mustard	nucleus	18.69	30.68
Bra030178.1-P	Field mustard	nucleus	28.37	29.6
Bra032340.1-P	Field mustard	nucleus	27.68	29.3
Bra004864.1-P	Field mustard	nucleus	21.8	29.3
Bra000362.1-P	Field mustard	nucleus	21.11	29.05
Bra036138.1-P	Field mustard	nucleus	34.26	28.05
Bra004466.1-P	Field mustard	nucleus	30.8	27.9
Bra040926.1-P	Field mustard	nucleus	28.37	27.89
Bra027768.1-P	Field mustard	nucleus	17.99	27.81
Bra021393.1-P	Field mustard	nucleus	30.8	27.55
Bra037796.1-P	Field mustard	nucleus	15.92	27.38
Bra027675.1-P	Field mustard	nucleus	17.65	26.98
Bra036563.1-P	Field mustard	nucleus	14.53	26.58
Bra013289.1-P	Field mustard	nucleus	28.03	26.3
Bra024328.1-P	Field mustard	nucleus	18.69	26.21
Bra012614.1-P	Field mustard	nucleus	28.03	25.96
Bra007674.1-P	Field mustard	nucleus	26.3	25.5
Bra020628.1-P	Field mustard	nucleus	34.26	25.26
Bra025021.1-P	Field mustard	nucleus	27.68	24.77
Bra010032.1-P	Field mustard	nucleus	33.56	24.31
Bra022033.1-P	Field mustard	nucleus	26.64	24.29
Bra017561.1-P	Field mustard	nucleus	26.64	23.99
Bra031900.1-P	Field mustard	nucleus	15.57	22.84
Bra010683.1-P	Field mustard	nucleus	22.49	21.96
Bra033616.1-P	Field mustard	nucleus	22.15	21.92
Bra011861.1-P	Field mustard	nucleus	22.15	21.48
Bra037637.1-P	Field mustard	nucleus	12.11	19.34

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra004002	EnsemblPlants:Bra004002.1	EnsemblPlants:Bra004002.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4CIG8	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF77	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000254197D	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT1G69310 (E=1e-080) WRKY57, ATWRKY57 | WRKY57; transcription factor

Coordinates

chrA07:+:16233646..16235503

Molecular Weight (calculated)

31976.5 Da

IEP (calculated)

6.585

GRAVY (calculated)

-0.872

Length

289 amino acids

Sequence
(BLAST)

001: MNDPKDPDLS DDSAWRELTA SDSDFFYRDT STILSEFAWN LHASSSFTQT AGVPSSITTT TSKTDQPIPT SSGSSSAAAS VTVTEVSTNI NNPSTATSSS
101: SEDPTESSTA SAAKTPETPK KEKKKAQKQI RQQRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSSFPRSYY RCTNSRCTVK KRVERSSEDP SIVITTYEGQ
201: HCHQTVGFPR GGIFPAHDPH NFTSHHHLPP PLPNPYYYQE LLHQLHSENT SSLQLPQSTT EDGHVAVSSI NQPEEGLLGD IVPQTMRNP

Best Arabidopsis Sequence Match ( AT1G69310.4 )
(BLAST)

001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP

Arabidopsis Description

WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.