Factsheet for Bra037637.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004864.1-P	Field mustard	nucleus	84.53	71.16
Bra000362.1-P	Field mustard	nucleus	78.45	67.62
Os02t0652100-01	Rice	extracellular, mitochondrion, nucleus	34.25	38.04
Bra040557.1-P	Field mustard	nucleus	19.34	24.31
Bra010683.1-P	Field mustard	nucleus	34.25	20.95
Bra033616.1-P	Field mustard	nucleus	33.7	20.89
Bra011861.1-P	Field mustard	nucleus	33.7	20.47
Bra006178.1-P	Field mustard	nucleus	16.02	19.73
Bra020546.1-P	Field mustard	nucleus	18.23	19.64
Bra009885.1-P	Field mustard	nucleus	17.68	18.18
Bra008858.1-P	Field mustard	nucleus	14.36	17.69
Bra025490.1-P	Field mustard	nucleus	16.57	17.24
Bra027675.1-P	Field mustard	nucleus	16.57	15.87
Bra027768.1-P	Field mustard	nucleus	16.02	15.51
Bra037796.1-P	Field mustard	nucleus	14.36	15.48
Bra024328.1-P	Field mustard	nucleus	16.57	14.56
Bra040926.1-P	Field mustard	nucleus	23.2	14.29
Bra012614.1-P	Field mustard	nucleus	24.31	14.1
Bra036563.1-P	Field mustard	nucleus	12.15	13.92
Bra031900.1-P	Field mustard	nucleus	14.92	13.71
Bra013289.1-P	Field mustard	nucleus	23.2	13.64
Bra032340.1-P	Field mustard	nucleus	19.89	13.19
Bra030178.1-P	Field mustard	nucleus	19.89	13.0
Bra004370.1-P	Field mustard	nucleus	19.89	12.24
Bra004466.1-P	Field mustard	nucleus	21.55	12.23
Bra004002.1-P	Field mustard	nucleus	19.34	12.11
Bra025021.1-P	Field mustard	nucleus	21.55	12.07
Bra038313.1-P	Field mustard	nucleus	19.89	12.04
Bra022033.1-P	Field mustard	nucleus	20.99	11.99
Bra017561.1-P	Field mustard	nucleus	20.99	11.84
Bra021393.1-P	Field mustard	nucleus	20.44	11.46
Bra007674.1-P	Field mustard	nucleus	17.68	10.74
Bra036138.1-P	Field mustard	nucleus	20.44	10.48
Bra020628.1-P	Field mustard	nucleus	20.99	9.69
Bra010032.1-P	Field mustard	nucleus	20.99	9.52

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra037637	EnsemblPlants:Bra037637.1	EnsemblPlants:Bra037637.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4F974	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF17	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002544080	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G44745 (E=2e-066) | WRKY family transcription factor

Coordinates

chrA04:-:18384870..18386008

Molecular Weight (calculated)

20266.7 Da

IEP (calculated)

9.139

GRAVY (calculated)

-0.654

Length

181 amino acids

Sequence
(BLAST)

001: MEGGRRVVVN NYDLQQVTSS ATIQENMNFL VPFEETNVLT FFSSSSSSSL PSPSFPIHNS SSTTNTTHAP LGFSNNLQVG GPLGSKVVND DHENIGGEIN
101: NDVHSNWWRS SSGSGEMKNK VKIRRKLREP RFCFQTKSDV DVLDDGYKWR KYGQKVVKNS LHPRLLPNAS SSTRHDCLYI M

Best Arabidopsis Sequence Match ( AT2G44745.1 )
(BLAST)

001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF

Arabidopsis Description

WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.