Factsheet for Bra008858.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012351.1-P
Bra024548.1-P
Bra037588.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13080.1	Bra012351.1-P	AT1G22920.1	21798944
AT5G13080.1	Bra024548.1-P	AT1G22920.1	21798944
AT5G13080.1	Bra037588.1-P	AT3G18360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69672	Canola	nucleus	100.0	100.0
AT5G13080.1	Thale cress	nucleus, plastid	87.76	88.97
Bra006178.1-P	Field mustard	nucleus	87.07	87.07
GSMUA_Achr9P07230_001	Banana	mitochondrion	48.98	62.61
Solyc05g015850.2.1	Tomato	nucleus	69.39	59.3
PGSC0003DMT400056352	Potato	nucleus	69.39	59.3
Bra040557.1-P	Field mustard	nucleus	51.02	52.08
KRG94564	Soybean	nucleus	61.22	47.87
VIT_01s0010g03930.t01	Wine grape	nucleus, plastid	60.54	47.09
VIT_14s0068g01770.t01	Wine grape	nucleus	57.82	46.7
Bra025490.1-P	Field mustard	nucleus	44.9	37.93
Bra027768.1-P	Field mustard	nucleus	44.9	35.29
Bra027675.1-P	Field mustard	nucleus	44.9	34.92
Bra020546.1-P	Field mustard	nucleus	32.65	28.57
Bra009885.1-P	Field mustard	nucleus	32.65	27.27
Bra037796.1-P	Field mustard	nucleus	30.61	26.79
Bra036563.1-P	Field mustard	nucleus	25.85	24.05
Bra000362.1-P	Field mustard	nucleus	34.01	23.81
Bra004864.1-P	Field mustard	nucleus	34.69	23.72
Bra031900.1-P	Field mustard	nucleus	29.93	22.34
Bra024328.1-P	Field mustard	nucleus	29.93	21.36
Bra004002.1-P	Field mustard	nucleus	39.46	20.07
Bra030178.1-P	Field mustard	nucleus	36.73	19.49
Bra004370.1-P	Field mustard	nucleus	37.41	18.71
Bra032340.1-P	Field mustard	nucleus	34.69	18.68
Bra038313.1-P	Field mustard	nucleus	37.41	18.39
Bra013289.1-P	Field mustard	nucleus	38.1	18.18
Bra007674.1-P	Field mustard	nucleus	36.73	18.12
Bra040926.1-P	Field mustard	nucleus	36.05	18.03
Bra004466.1-P	Field mustard	nucleus	38.78	17.87
Bra033616.1-P	Field mustard	nucleus	34.69	17.47
Bra021393.1-P	Field mustard	nucleus	38.1	17.34
Bra012614.1-P	Field mustard	nucleus	36.73	17.31
Bra010683.1-P	Field mustard	nucleus	34.69	17.23
Bra011861.1-P	Field mustard	nucleus	34.01	16.78
Bra036138.1-P	Field mustard	nucleus	39.46	16.43
Bra022033.1-P	Field mustard	nucleus	35.37	16.4
Bra025021.1-P	Field mustard	nucleus	35.37	16.1
Bra010032.1-P	Field mustard	nucleus	42.18	15.54
Bra020628.1-P	Field mustard	nucleus	40.82	15.31
Bra017561.1-P	Field mustard	nucleus	33.33	15.26
Bra037637.1-P	Field mustard	nucleus	17.69	14.36

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra008858	EnsemblPlants:Bra008858.1	EnsemblPlants:Bra008858.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4CXB1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF25	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002543B52	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT5G13080 (E=6e-064) WRKY75, ATWRKY75 | WRKY75; transcription factor

Coordinates

chrA10:+:14163015..14164015

Molecular Weight (calculated)

17074.1 Da

IEP (calculated)

10.007

GRAVY (calculated)

-1.080

Length

147 amino acids

Sequence
(BLAST)

001: MEGYDDGSLY APFLSLKPHQ SLSKSELEQG REEASKVREG SSRSKELKKK KGKKQKFAFQ TRSQVDILDD GYRWRKYGQK AVKNNKFPRS YYRCTHGGCN
101: VKKQVQRLTS DQEVVVTTYE GVHSHPIEKS TENFEHILTQ MQIYSSF

Best Arabidopsis Sequence Match ( AT5G13080.1 )
(BLAST)

001: MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK
101: KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF

Arabidopsis Description

WRKY75WRKY75 [Source:UniProtKB/TrEMBL;Acc:A0A178UJF4]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.