Factsheet for Bra020628.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05620	Canola	nucleus	96.17	96.42
Bra036138.1-P	Field mustard	nucleus	72.45	80.45
Bra010032.1-P	Field mustard	nucleus	81.63	80.2
AT5G49520.1	Thale cress	nucleus	80.36	78.95
Bra040557.1-P	Field mustard	nucleus	16.33	44.44
VIT_05s0077g00730.t01	Wine grape	nucleus	34.44	43.69
Bra006178.1-P	Field mustard	nucleus	15.31	40.82
Bra008858.1-P	Field mustard	nucleus	15.31	40.82
KRH36956	Soybean	nucleus	33.93	40.18
KRH11917	Soybean	nucleus	33.67	37.08
GSMUA_AchrUn_...	Banana	nucleus	27.81	36.21
GSMUA_Achr8P10740_001	Banana	nucleus	27.55	34.5
Bra004002.1-P	Field mustard	nucleus	25.26	34.26
Bra032340.1-P	Field mustard	nucleus	23.72	34.07
Bra030178.1-P	Field mustard	nucleus	23.98	33.94
Bra038313.1-P	Field mustard	nucleus	25.77	33.78
Bra004370.1-P	Field mustard	nucleus	25.26	33.67
Bra020546.1-P	Field mustard	nucleus	14.29	33.33
Bra040926.1-P	Field mustard	nucleus	25.0	33.33
Bra025490.1-P	Field mustard	nucleus	14.8	33.33
Bra012614.1-P	Field mustard	nucleus	26.28	33.01
Bra004466.1-P	Field mustard	nucleus	26.28	32.29
Bra022033.1-P	Field mustard	nucleus	25.77	31.86
Bra021393.1-P	Field mustard	nucleus	26.02	31.58
Bra013289.1-P	Field mustard	nucleus	24.49	31.17
Bra027768.1-P	Field mustard	nucleus	14.8	31.02
Bra007674.1-P	Field mustard	nucleus	23.47	30.87
Bra027675.1-P	Field mustard	nucleus	14.8	30.69
Bra009885.1-P	Field mustard	nucleus	13.78	30.68
Bra000362.1-P	Field mustard	nucleus	16.33	30.48
Bra037796.1-P	Field mustard	nucleus	13.01	30.36
Bra004864.1-P	Field mustard	nucleus	16.58	30.23
Bra025021.1-P	Field mustard	nucleus	24.49	29.72
Bra017561.1-P	Field mustard	nucleus	24.23	29.59
Bra036563.1-P	Field mustard	nucleus	11.48	28.48
Bra024328.1-P	Field mustard	nucleus	14.8	28.16
Bra031900.1-P	Field mustard	nucleus	13.52	26.9
Bra010683.1-P	Field mustard	nucleus	18.11	23.99
Bra011861.1-P	Field mustard	nucleus	17.86	23.49
Bra033616.1-P	Field mustard	nucleus	16.84	22.6
Bra037637.1-P	Field mustard	nucleus	9.69	20.99

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra020628	EnsemblPlants:Bra020628.1	EnsemblPlants:Bra020628.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DVT4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF80	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002546700	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT5G49520 (E=5e-119) WRKY48, ATWRKY48 | WRKY48; transcription factor

Coordinates

chrA02:+:24108710..24110666

Molecular Weight (calculated)

43588.0 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.910

Length

392 amino acids

Sequence
(BLAST)

001: MEKKIKEDHH QELQKEEPNS TKNTETTTSS STHMMNLITT SDHHQMELAG NNMNLSSSFD IPISSPFAYS YFEDHSSNNP NSFLDLLRQD QHQFASSSNS
101: SSFSFNAFPL QNNTNHIFTD LPLSQPVTTK DESSEVVSTT PTSPNATSFS SSSNEAANDN INKEVTVKDQ EDGDQHGPKG TKPQLKAKKK QQKKAREARV
201: AFLTKSDIDN LDDGYRWRKY GQKAVKNSPY PRSYYRCTTV GCGVKKRVER SSDDPSIVMT TYEGQHTHAF PMTPRGHIGM LTSPILDHGA TTASSSSSFS
301: IPQPRYLLSQ HHQPYNIMYN NNSLSMINRS SSSDGSFVNP GSSSFHGFGC DMSQASTSTT AAIRDHGLLQ DILTSKIRSD TINTRTNEED NK

Best Arabidopsis Sequence Match ( AT5G49520.1 )
(BLAST)

001: MEKKKEEDHH HQQQQQQQKE IKNTETKIEQ EQEQEQKQEI SQASSSSNMA NLVTSSDHHP LELAGNLSSI FDTSSLPFPY SYFEDHSSNN PNSFLDLLRQ
101: DHQFASSSNS SSFSFDAFPL PNNNNNTSFF TDLPLPQAES SEVVNTTPTS PNSTSVSSSS NEAANDNNSG KEVTVKDQEE GDQQQEQKGT KPQLKAKKKN
201: QKKAREARFA FLTKSDIDNL DDGYRWRKYG QKAVKNSPYP RSYYRCTTVG CGVKKRVERS SDDPSIVMTT YEGQHTHPFP MTPRGHIGML TSPILDHGAT
301: TASSSSFSIP QPRYLLTQHH QPYNMYNNNS LSMINRRSSD GTFVNPGPSS SFPGFGYDMS QASTSTSSSI RDHGLLQDIL PSQIRSDTIN TQTNEENKK

Arabidopsis Description

WRKY48Probable WRKY transcription factor 48 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.