Factsheet for Bra004864.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71963	Canola	nucleus	97.67	98.13
CDY48258	Canola	nucleus	97.21	97.21
Bra000362.1-P	Field mustard	nucleus	86.05	88.1
Bra037637.1-P	Field mustard	nucleus	71.16	84.53
GSMUA_Achr4P17890_001	Banana	nucleus	40.47	77.68
GSMUA_Achr7P06860_001	Banana	nucleus	41.86	76.92
KRH66475	Soybean	nucleus	58.6	52.94
KRH48843	Soybean	nucleus	57.21	51.9
Solyc01g089960.2.1	Tomato	nucleus	55.35	50.42
KRH40189	Soybean	nucleus	55.35	50.0
PGSC0003DMT400080069	Potato	nucleus	54.88	47.01
TraesCS2A01G392100.1	Wheat	nucleus	46.51	43.67
HORVU6Hr1G061940.1	Barley	nucleus	46.05	43.61
HORVU2Hr1G093350.3	Barley	nucleus	46.51	43.48
TraesCS2D01G390200.1	Wheat	nucleus	46.05	43.23
TraesCS2B01G410400.1	Wheat	nucleus	46.05	43.23
Zm00001d017444_P001	Maize	extracellular, vacuole	46.05	42.86
Zm00001d051328_P002	Maize	nucleus	46.05	42.13
KXG31104	Sorghum	nucleus	46.51	42.02
TraesCS6D01G223900.1	Wheat	cytosol	46.05	41.95
TraesCS6A01G242000.1	Wheat	nucleus	46.05	41.95
TraesCS6B01G282500.1	Wheat	nucleus	46.05	41.95
Os04t0545000-01	Rice	cytosol	45.12	38.8
Bra040557.1-P	Field mustard	nucleus	25.58	38.19
KXG26824	Sorghum	nucleus	46.51	37.17
Bra006178.1-P	Field mustard	nucleus	23.72	34.69
Bra008858.1-P	Field mustard	nucleus	23.72	34.69
Zm00001d002794_P001	Maize	nucleus	45.58	34.51
Bra020546.1-P	Field mustard	nucleus	25.58	32.74
Bra033616.1-P	Field mustard	nucleus	42.79	31.51
Bra011861.1-P	Field mustard	nucleus	43.26	31.21
Bra009885.1-P	Field mustard	nucleus	25.12	30.68
Bra010683.1-P	Field mustard	nucleus	41.86	30.41
Bra025490.1-P	Field mustard	nucleus	24.19	29.89
Bra027675.1-P	Field mustard	nucleus	25.58	29.1
Bra027768.1-P	Field mustard	nucleus	25.12	28.88
Bra037796.1-P	Field mustard	nucleus	21.86	27.98
Bra036563.1-P	Field mustard	nucleus	20.47	27.85
Bra024328.1-P	Field mustard	nucleus	24.65	25.73
Bra031900.1-P	Field mustard	nucleus	23.26	25.38
Bra040926.1-P	Field mustard	nucleus	31.63	23.13
Bra030178.1-P	Field mustard	nucleus	29.77	23.1
Bra032340.1-P	Field mustard	nucleus	29.3	23.08
Bra004002.1-P	Field mustard	nucleus	29.3	21.8
Bra012614.1-P	Field mustard	nucleus	31.63	21.79
Bra004370.1-P	Field mustard	nucleus	29.77	21.77
Bra013289.1-P	Field mustard	nucleus	30.7	21.43
Bra038313.1-P	Field mustard	nucleus	29.77	21.4
Bra004466.1-P	Field mustard	nucleus	29.77	20.06
Bra022033.1-P	Field mustard	nucleus	29.3	19.87
Bra025021.1-P	Field mustard	nucleus	29.3	19.5
Bra007674.1-P	Field mustard	nucleus	26.98	19.46
Bra017561.1-P	Field mustard	nucleus	28.84	19.31
Bra021393.1-P	Field mustard	nucleus	28.37	18.89
Bra036138.1-P	Field mustard	nucleus	29.77	18.13
Bra020628.1-P	Field mustard	nucleus	30.23	16.58
Bra010032.1-P	Field mustard	nucleus	30.7	16.54

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:ADD81254	ProteinID:ADD81254.1	EnsemblPlantsGene:Bra004864	EnsemblPlants:Bra004864.1
EnsemblPlants:Bra004864.1-P	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
EMBL:GQ168839	InterPro:IPR003657	InterPro:IPR036576	UniProt:M4CKX8	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF17	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002547E2D	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

AT2G44745 (E=2e-087) | WRKY family transcription factor

Coordinates

chrA05:-:2169762..2171241

Molecular Weight (calculated)

24429.2 Da

IEP (calculated)

8.724

GRAVY (calculated)

-0.867

Length

215 amino acids

Sequence
(BLAST)

001: MEGGGRRVVV NNYDLQQVTI QENMNFLIPF EETNVLTFFS SSSSSSLSSP SFPIHNSSST TNTTHAPLGF PNNLQDGGPL GSKVVNDDQD NFRGVINNDA
101: HSSSWWRSSS GSGESKNKVK IRRKLREPRF CFQTKSDVDV LDDGYKWRKY GQKIVKNSLH PRSYYRCTHN NCRVKKRVER LSEDCRMVIT TYEGRHSHIP
201: SDESNSPDHD CLSSF

Best Arabidopsis Sequence Match ( AT2G44745.1 )
(BLAST)

001: MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN
101: NDAHSNSWWR SNSGSGDMKN KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR VERLSEDCRM VITTYEGRHN
201: HIPSDDSTSP DHDCLSSF

Arabidopsis Description

WRKY12At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.