Factsheet for Bra004370.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95947	Canola	nucleus	100.0	100.0
CDY40910	Canola	nucleus	96.6	96.6
AT1G69310.2	Thale cress	nucleus	77.21	79.09
Bra004002.1-P	Field mustard	nucleus	76.19	77.51
Bra038313.1-P	Field mustard	nucleus	78.23	76.92
KRH70870	Soybean	nucleus	48.64	48.81
KRH75010	Soybean	nucleus	48.3	47.81
VIT_01s0011g00720.t01	Wine grape	nucleus	48.98	47.21
Os03t0758000-01	Rice	nucleus, plastid	32.31	41.13
Bra040557.1-P	Field mustard	nucleus	19.73	40.28
GSMUA_Achr4P23360_001	Banana	nucleus	35.71	40.08
PGSC0003DMT400072958	Potato	mitochondrion, nucleus	43.88	39.57
Solyc05g012500.2.1	Tomato	nucleus	43.54	39.14
Os07t0111400-00	Rice	nucleus	38.1	38.62
HORVU0Hr1G003340.1	Barley	nucleus	36.39	37.54
Bra008858.1-P	Field mustard	nucleus	18.71	37.41
Bra006178.1-P	Field mustard	nucleus	18.71	37.41
TraesCS2B01G280300.1	Wheat	nucleus	36.05	37.19
KXG34273	Sorghum	mitochondrion	34.01	36.76
TraesCS2A01G261900.1	Wheat	nucleus	35.37	36.36
TraesCS2D01G262100.1	Wheat	nucleus	35.03	36.14
TraesCS5D01G404400.1	Wheat	nucleus	37.76	35.81
TraesCS5B01G399900.1	Wheat	nucleus	37.76	35.69
TraesCS5A01G395100.1	Wheat	nucleus	37.07	35.16
EER90854	Sorghum	nucleus	38.1	33.84
HORVU5Hr1G096420.20	Barley	mitochondrion, nucleus	34.35	33.44
Zm00001d018656_P001	Maize	nucleus	37.41	33.13
Bra020546.1-P	Field mustard	nucleus	18.37	32.14
Zm00001d034073_P001	Maize	nucleus	36.05	32.02
Bra025490.1-P	Field mustard	nucleus	18.71	31.61
Bra030178.1-P	Field mustard	nucleus	28.57	30.32
Bra032340.1-P	Field mustard	nucleus	27.89	30.04
Bra004466.1-P	Field mustard	nucleus	32.31	29.78
Bra004864.1-P	Field mustard	nucleus	21.77	29.77
Bra021393.1-P	Field mustard	nucleus	32.65	29.72
Bra009885.1-P	Field mustard	nucleus	17.69	29.55
Bra000362.1-P	Field mustard	nucleus	21.09	29.52
Bra040926.1-P	Field mustard	nucleus	29.25	29.25
Bra036138.1-P	Field mustard	nucleus	33.67	28.05
Bra027675.1-P	Field mustard	nucleus	18.03	28.04
Bra037796.1-P	Field mustard	nucleus	15.99	27.98
Bra027768.1-P	Field mustard	nucleus	17.69	27.81
Bra012614.1-P	Field mustard	nucleus	29.25	27.56
Bra007674.1-P	Field mustard	nucleus	27.55	27.18
Bra013289.1-P	Field mustard	nucleus	28.23	26.95
Bra024328.1-P	Field mustard	nucleus	18.37	26.21
Bra025021.1-P	Field mustard	nucleus	28.57	26.01
Bra036563.1-P	Field mustard	nucleus	13.95	25.95
Bra022033.1-P	Field mustard	nucleus	27.55	25.55
Bra017561.1-P	Field mustard	nucleus	27.89	25.55
Bra020628.1-P	Field mustard	nucleus	33.67	25.26
Bra010032.1-P	Field mustard	nucleus	33.33	24.56
Bra031900.1-P	Field mustard	nucleus	15.65	23.35
Bra010683.1-P	Field mustard	nucleus	22.79	22.64
Bra033616.1-P	Field mustard	nucleus	22.45	22.6
Bra011861.1-P	Field mustard	nucleus	22.11	21.81
Bra037637.1-P	Field mustard	nucleus	12.24	19.89

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra004370	EnsemblPlants:Bra004370.1	EnsemblPlants:Bra004370.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4CJI6	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF77	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002541836	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT1G69310 (E=6e-091) WRKY57, ATWRKY57 | WRKY57; transcription factor

Coordinates

chrA07:-:18298720..18300669

Molecular Weight (calculated)

32520.3 Da

IEP (calculated)

7.452

GRAVY (calculated)

-0.889

Length

294 amino acids

Sequence
(BLAST)

001: MTDPKDPDLS NEDSAWRQLT APDSVFFNRD TSSILSDFGW NLHASSSDNH HNLRFDPCLP PTSTVPSSVT TTATPDPIPA SSHSSTVAAA TASVVSTSNN
101: PSATSSSSEG PTDNSTPKTP ETPKKEKKQA QKRIRQPRFA FMTKSDVDNL EDGYRWRKYG QKAVKNSPFP RSYYRCTNSR CTVKKRVERS SEDPSIVITT
201: YEGQHCHQTI GFPRGGILTA HDPHNFTSHH HHLPLPLPNP YYYQDLHQLH RDSTSSPRLL PQSTTEDGPA AVSSINPSEE GLLGDIVPQT MRNP

Best Arabidopsis Sequence Match ( AT1G69310.4 )
(BLAST)

001: MNDPDNPDLS NDDSAWRELT LTAQDSDFFD RDTSNILSDF GWNLHHSSDH PHSLRFDSDL TQTTGVKPTT VTSSCSSSAA VSVAVTSTNN NPSATSSSSE
101: DPAENSTASA EKTPPPETPV KEKKKAQKRI RQPRFAFMTK SDVDNLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSRCTVK KRVERSSDDP SIVITTYEGQ
201: HCHQTIGFPR GGILTAHDPH SFTSHHHLPP PLPNPYYYQE LLHQLHRDNN APSPRLPRPT TEDTPAVSTP SEEGLLGDIV PQTMRNP

Arabidopsis Description

WRKY57At1g69310 [Source:UniProtKB/TrEMBL;Acc:Q147N6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.