Factsheet for Bra004466.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80094	Canola	nucleus	98.43	99.37
CDY37794	Canola	nucleus	96.24	98.08
Bra021393.1-P	Field mustard	nucleus	79.94	78.95
AT2G47260.1	Thale cress	nucleus	79.94	75.67
VIT_07s0005g01710.t01	Wine grape	nucleus	42.95	45.36
Bra040557.1-P	Field mustard	nucleus	20.38	45.14
KRH31775	Soybean	nucleus	45.14	44.58
KRH69197	Soybean	nucleus	44.51	44.38
Bra006178.1-P	Field mustard	nucleus	18.5	40.14
Bra008858.1-P	Field mustard	nucleus	17.87	38.78
PGSC0003DMT400023368	Potato	nucleus	36.36	36.59
Solyc01g079260.2.1	Tomato	nucleus	36.05	35.94
Bra007674.1-P	Field mustard	nucleus	32.92	35.23
Bra040926.1-P	Field mustard	nucleus	31.03	33.67
Bra030178.1-P	Field mustard	nucleus	29.15	33.57
Bra020546.1-P	Field mustard	nucleus	17.55	33.33
Bra009885.1-P	Field mustard	nucleus	18.18	32.95
Bra036563.1-P	Field mustard	nucleus	16.3	32.91
Bra032340.1-P	Field mustard	nucleus	27.9	32.6
Bra004370.1-P	Field mustard	nucleus	29.78	32.31
Bra012614.1-P	Field mustard	nucleus	31.35	32.05
Bra013289.1-P	Field mustard	nucleus	30.72	31.82
Bra025490.1-P	Field mustard	nucleus	16.93	31.03
Bra004002.1-P	Field mustard	nucleus	27.9	30.8
Bra027675.1-P	Field mustard	nucleus	17.87	30.16
Bra000362.1-P	Field mustard	nucleus	19.75	30.0
Bra027768.1-P	Field mustard	nucleus	17.55	29.95
Bra004864.1-P	Field mustard	nucleus	20.06	29.77
Bra036138.1-P	Field mustard	nucleus	32.29	29.18
Bra025021.1-P	Field mustard	nucleus	29.47	29.1
Bra022033.1-P	Field mustard	nucleus	28.84	29.02
Bra038313.1-P	Field mustard	nucleus	26.96	28.76
Bra017561.1-P	Field mustard	nucleus	28.84	28.66
Bra010032.1-P	Field mustard	nucleus	32.92	26.32
Bra020628.1-P	Field mustard	nucleus	32.29	26.28
Bra037796.1-P	Field mustard	nucleus	13.79	26.19
Bra024328.1-P	Field mustard	nucleus	16.3	25.24
Bra010683.1-P	Field mustard	nucleus	22.57	24.32
Bra011861.1-P	Field mustard	nucleus	22.26	23.83
Bra033616.1-P	Field mustard	nucleus	21.32	23.29
Bra031900.1-P	Field mustard	nucleus	14.11	22.84
Bra037637.1-P	Field mustard	nucleus	12.23	21.55

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra004466	EnsemblPlants:Bra004466.1	EnsemblPlants:Bra004466.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009624
GO:GO:0009719	GO:GO:0009733	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4CJT2	PFAM:PF03106	PIRSF:PIRSF038130	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF80
SMART:SM00774	SUPFAM:SSF118290	InterPro:TF_WRKY_IIc	UniParc:UPI00025480C0	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

AT2G47260 (E=8e-101) WRKY23, ATWRKY23 | WRKY23; transcription factor

Coordinates

chrA05:+:274575..276116

Molecular Weight (calculated)

36029.8 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.874

Length

319 amino acids

Sequence
(BLAST)

001: MEFTSFHQPS LQSIWDFGEE ERDSLGFMEL LGSQHHSLLL ETLQPQAQPF EKLSSSDLTI LQAPPSNATA DKYVTSKVES LCSDINPPAT PNSSSISSAS
101: SEAVDEDKAK REENEEHEQQ KSDTKKQLKP KKNSQKRQRE ARIAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC TTASCNVKKR VERSFRDPST
201: VVTTYEGQHT HISPLTSRPI SSGGFFFGSS GVASNLGNFG FPMESSTLIY PQFQQLVHYN QQQQQQQQEL FPCFGGVGEY VTRHADAYGD DERVKKSRGL
301: GKDNGLLQDV VPSHMLKEE

Best Arabidopsis Sequence Match ( AT2G47260.1 )
(BLAST)

001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE

Arabidopsis Description

WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.