Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37794 | Canola | nucleus | 75.67 | 81.47 |
| CDX80094 | Canola | nucleus | 75.37 | 80.38 |
| Bra004466.1-P | Field mustard | nucleus | 75.67 | 79.94 |
| AT2G46130.1 | Thale cress | nucleus | 15.13 | 46.79 |
| VIT_07s0005g01710.t01 | Wine grape | nucleus | 40.65 | 45.36 |
| KRH69197 | Soybean | nucleus | 42.14 | 44.38 |
| KRH31775 | Soybean | nucleus | 42.43 | 44.27 |
| AT3G01970.1 | Thale cress | nucleus | 18.99 | 43.54 |
| AT5G13080.1 | Thale cress | nucleus, plastid | 18.1 | 42.07 |
| PGSC0003DMT400023368 | Potato | nucleus | 35.31 | 37.54 |
| AT3G62340.1 | Thale cress | nucleus | 30.27 | 36.82 |
| Solyc01g079260.2.1 | Tomato | nucleus | 34.42 | 36.25 |
| AT5G26170.1 | Thale cress | nucleus | 18.4 | 35.84 |
| AT1G29860.1 | Thale cress | nucleus | 29.97 | 35.82 |
| AT1G69310.2 | Thale cress | nucleus | 28.49 | 33.45 |
| AT4G18170.1 | Thale cress | nucleus | 30.86 | 32.7 |
| AT2G44745.1 | Thale cress | nucleus | 19.88 | 30.73 |
| AT5G41570.1 | Thale cress | nucleus | 16.32 | 30.73 |
| AT1G64000.1 | Thale cress | nucleus | 16.91 | 29.23 |
| AT5G46350.1 | Thale cress | nucleus | 27.89 | 28.83 |
| AT5G49520.1 | Thale cress | nucleus | 33.53 | 28.32 |
| AT5G64810.1 | Thale cress | nucleus | 15.73 | 27.32 |
| AT4G39410.1 | Thale cress | nucleus | 22.26 | 24.67 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:819339 | ProteinID:AAB63826.1 | ProteinID:AEC10821.1 | EMBL:AK117918 |
| ArrayExpress:AT2G47260 | EnsemblPlantsGene:AT2G47260 | RefSeq:AT2G47260 | TAIR:AT2G47260 | RefSeq:AT2G47260-TAIR-G | EnsemblPlants:AT2G47260.1 |
| TAIR:AT2G47260.1 | EMBL:AY052647 | EMBL:AY084658 | Unigene:At.24867 | EMBL:BT006238 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_182248.1 |
| UniProt:O22900 | PFAM:PF03106 | PIRSF:PIRSF038130 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF80 | SMART:SM00774 |
| SUPFAM:SSF118290 | InterPro:TF_WRKY_IIc | UniParc:UPI00000AC5CD | Symbol:WRKY23 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
WRKY23Probable WRKY transcription factor 23 [Source:UniProtKB/Swiss-Prot;Acc:O22900]
Coordinates
chr2:-:19404802..19407098
Molecular Weight (calculated)
37686.6 Da
IEP (calculated)
6.954
GRAVY (calculated)
-0.809
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTDFSKTS FYYPSSQSVW DFGDLAAAER HSLGFMELLS SQQHQDFATV SPHSFLLQTS QPQTQTQPSA KLSSSIIQAP PSEQLVTSKV ESLCSDHLLI
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
101: NPPATPNSSS ISSASSEALN EEKPKTEDNE EEGGEDQQEK SHTKKQLKAK KNNQKRQREA RVAFMTKSEV DHLEDGYRWR KYGQKAVKNS PFPRSYYRCT
201: TASCNVKKRV ERSFRDPSTV VTTYEGQHTH ISPLTSRPIS TGGFFGSSGA ASSLGNGCFG FPIDGSTLIS PQFQQLVQYH HQQQQQELMS CFGGVNEYLN
301: SHANEYGDDN RVKKSRVLVK DNGLLQDVVP SHMLKEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.